Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g01562 ATGCATCCTTTCTGCTGTGTCTCCGCCATCTCTGATCACTCTTCTGCCTTGAAACCCTCGCCAACTGCCGGTCATCTCGCCGGCTTCGCCATGCCTCCTCTTCCCTCCGCCGTGAGATCCGATTCGATTCCACAGTCCGCCGACCATGGCAACATCAACCACTGCGTCACGAACGGCGGAGATAGCAGCCGTGTGAGTCAGCAGCAGCAGATGTTGCCTGCGGCGGCGACGGCGGTTGACGTGAGGATCAACGACCTCGTCGGTAACGGAATCGCAGGGATACTTCAGAAGTGGGTGAACTACGGTAAAGGATGGAGGCCACGGTGGTTCGTGCTTCAAGATGGTGTTCTTTCCTATTACAAGATTCACGGACCCGACAAGATCGTTGTTAATTCCGAAACTGAGAAAGGATCCAAGGTTATTGGTGATGAATCCATGCGCATCATCTCTCGTAAGCGCAATTCTCAACGTTCCAATCACCACAACAACTTCCACCATCGACGAAAGCCCTTTGGTGAAATCCATCTCAAGGTTTCAACTATTCGCGAGAGCAGATCGGATGACAAGCGCTTTTCCATTTTCACTGGGACAAAGAGACTGCACTTGCGGGCTGAGACTCGTGAGGATCGAGTGGCGTGGATGGAGGCCTTGCAGGCAGTGAAAGATATGTTCCCGCGGATGTCCAACAGTGAGCTGATGGCTCCGGTGGACAATGTGGCCATTTCGACTGAGAAACTGAGGAATCGGCTTGTGCAAGAAGGTGTGAGTGAGGCAGCCATTCAGGATAGTGAGCAGATTATGAGAAATGAGTATGCAGCACTACAAAACCAGCTTCTGCTGCTTAAGCAAAAGCAGTTGACGCTAATTGACAATTTACGGCAATTGGAGACAGAGAAGGTTGATTTGGAGAACACTGTTGTTGATGAGAGCCAAAGACAGTTGAATGATCAAGAGGCTTCATCTACATTAAGGCAGGAAAAATTTAGTGAAGCAAGTGCAAGTGAGTCTGAGGATGATAATGAGAGAAATGATGTAGCAGAGGAAGAAACAGATGATGATGATGCTGCCTTTTTTGACACTCGTGATTTTCTATCAGGATCAAATTCTTTTAAAAGTAATGGATCTGATCTTAGAGTTTCATCTTTCTCTTCAGATGATGAAGGACTCTTTGCAGTTGAATCAGAGGAGGATGTAGATCCTTCTATTAGATCTATTGGGACCAAGTATCCTTCTGTTAAGCGGCGTAAGAAATTGCCTGACCCTATTGAAAAAGAAAAAGGTGTCAGTCTTTGGTCATTGATTAAGGATAATATCGGGAAGGATCTCACTAAAGTGTGCCTTCCTGTTTATTTTAATGAGCCTCTCTCTTCTCTGCAAAAATGTTGTGAAGAAATGGAGTGCTCGTATCTTCTGGACCGAGCATATGAATGGGGAAGAAGAGGCAATGGCCTCATGAGGATTCTCAATGTTGCTGCATTTGCTGTATCTGCCTATGCTTCAACTGAAGGGAAAATTTGCAAACCGTTTAATCCATTACTTGGGGAAACATATGAAGCTGACTTTCCAGATAAAGGCTTTCGTTTTATCTCTGAGAAGGTCAGTCATCACCCTATGATAGTTGCATGTCACTGTGAGGGTACAGGTTGGAAATTTTGGGGGGATAGCAACTTAAAGAGCAAATTTTGGGGCCGATCAATTCAACTTGATCCTGTTGGTATTTTGACTTTGGAATTTGATGATGGTGAAGTATTCCAGTGGAGTAAGGTTACTACATCAATATACAATCTCATATTGGGAAAGCTGTACTGTGATCACTATGGCACAATGCGTATACAGGGAAACCAAGAATACTCATGTAGACTGAAATTCAAGGAACAATCTATAATTGATCGAAATCCTCACCAGGTTCAGGGTATCGTTCAGAATAAAAATGGGAAAACATTGGCTACATTAATTGGAAAATGGGATGACAGCATGTATTATATTAATGGAGACTATGGTGGGAAGGGTAAAGGTTATGAATCATCGTCAGAAGCCCATCTACTATGGAAGCGGAGCAGGCCTCCCAAGTTTCCCACTAGATATAACTTCACTCGTTTTGCCATCACATTAAATGAACTTACTCCTGGATTAAAGGAAAAGCTGCCACCTACTGATTCCAGGTTAAGACCAGACCAAAGGTATTTGGAAAATGGGGAGTATGAGATGGCAAATTCAGAAAAGTTACGGCTAGAGCAGCGACAACGGCAGGCTAGGAAGATGCAAGAGAGCGGTTGGAAACCACGTTGGTTTACTTGGGATAAAGCAAGCGGTACCTATCGCTACTTAGGAGGGTATTGGGAGGCCCGAAAAGATAGAAACTGGAACAACTGTCCTGACATATTTGGCCAAATTCCTTCTGATCATCTTTTAGACGAAGTTAAGGTACCCCCATGA 2436 0.4479 MHPFCCVSAISDHSSALKPSPTAGHLAGFAMPPLPSAVRSDSIPQSADHGNINHCVTNGGDSSRVSQQQQMLPAAATAVDVRINDLVGNGIAGILQKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIVVNSETEKGSKVIGDESMRIISRKRNSQRSNHHNNFHHRRKPFGEIHLKVSTIRESRSDDKRFSIFTGTKRLHLRAETREDRVAWMEALQAVKDMFPRMSNSELMAPVDNVAISTEKLRNRLVQEGVSEAAIQDSEQIMRNEYAALQNQLLLLKQKQLTLIDNLRQLETEKVDLENTVVDESQRQLNDQEASSTLRQEKFSEASASESEDDNERNDVAEEETDDDDAAFFDTRDFLSGSNSFKSNGSDLRVSSFSSDDEGLFAVESEEDVDPSIRSIGTKYPSVKRRKKLPDPIEKEKGVSLWSLIKDNIGKDLTKVCLPVYFNEPLSSLQKCCEEMECSYLLDRAYEWGRRGNGLMRILNVAAFAVSAYASTEGKICKPFNPLLGETYEADFPDKGFRFISEKVSHHPMIVACHCEGTGWKFWGDSNLKSKFWGRSIQLDPVGILTLEFDDGEVFQWSKVTTSIYNLILGKLYCDHYGTMRIQGNQEYSCRLKFKEQSIIDRNPHQVQGIVQNKNGKTLATLIGKWDDSMYYINGDYGGKGKGYESSSEAHLLWKRSRPPKFPTRYNFTRFAITLNELTPGLKEKLPPTDSRLRPDQRYLENGEYEMANSEKLRLEQRQRQARKMQESGWKPRWFTWDKASGTYRYLGGYWEARKDRNWNNCPDIFGQIPSDHLLDEVKVPP* 812
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g01562 811 MobiDBLite consensus disorder prediction 311 352 - -
Rops9g01562 811 CDD PH_ORP_plant 91 229 - -
Rops9g01562 811 SUPERFAMILY PH domain-like 92 228 - -
Rops9g01562 811 Pfam Oxysterol-binding protein 429 784 IPR000648 GO:0008289
Rops9g01562 811 Pfam Pleckstrin homology domain 97 218 - -
Rops9g01562 811 Coils Coil 264 312 - -
Rops9g01562 811 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 90 783 IPR000648 GO:0008289
Rops9g01562 811 MobiDBLite consensus disorder prediction 311 329 - -
Rops9g01562 811 SMART PH_update 89 224 IPR001849 -
Rops9g01562 811 SUPERFAMILY Oxysterol-binding protein-like 424 801 IPR037239 -
Rops9g01562 811 Gene3D - 89 224 IPR011993 -
Rops9g01562 811 FunFam oxysterol-binding protein-related protein 1D isoform X1 515 687 - -
Rops9g01562 811 Gene3D - 515 690 - -
Rops9g01562 811 FunFam Oxysterol-binding protein-related protein 2A 726 797 - -
Rops9g01562 811 Gene3D - 726 792 - -
Rops9g01562 811 Coils Coil 734 754 - -
Rops9g01562 811 ProSiteProfiles PH domain profile. 88 222 IPR001849 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g01562 Rops-Chr9 27028783 27036075 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g01562 K20456 - gmx:100812036 1335.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops9g01562 9 27028783 27036075 Rops9g01562 9 27028783 27036075 ECH