Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g01561 ATGCGCGAAGCTCTCGCGTGCGATGACCACGGAGACGTTAGGAAGAAGAGCAAGCCTGAGCAGGAAAAGGAAGAAAAACCTTCACCGCCGGCGGTGGTCGCCGGAAGAAGCAGGTCACAAGGTGGAGGCCGAAGAGTGACGCCGGCGAGCGTGACGGTGGTTCCCAACGTTGGATCCGTGGTGGAGAGGTTTCTCCCTAACGGCGATTTCTACGTCGGAAGCTTCTCCGGTAACGTTCCTCACGGATCGGGGAAATACTTGTGGACGGACGGGTGCATGTACGAGGGTGAATGGAAACGCGGAAAGGCGTCAGGTAAAGGCAAATTTTCATGGCCGTCGGGTGCTACTTACGAAGGTGAATTCAAGTCGGGTCGGATGGAAGGTTTCGGGACCTTCGTCGGATCCGAAGGTGACACCTATCGCGGGTCATGGAGCTCCGACAGAAAACACGGGTTCGGGCGGAAACGTTACGCTAATGGAGACTTATACGAAGGGTGGTGGAAACGGAACTTACAAGACGGACAAGGCCGTTACGTTTGGAAAAACGGGAACCAGTACGTCGGGGAATGGCGTAACGGCGTCATTTCAGGGAAAGGTGAACTCGTCTGGCCTAACGGAAACCGTTACGAGGGACAATGGGATAACGGTGTTCCGAAGGGACAAGGGGTAATGAAAATACAGCATTGTTTGAACTTGAAAACCAGTGGGGGGTTTTCGTGGAAGGACAATTTTAGCCTTGCGATGAGGAAGAGGTCTTCGGTGGATGTTACTAGTGGTAGAGGGAGTGTGAATGAGAAGAGTTTTCCGAGGATTTGTATTTGGGAATCGGAAGGTGAAGCTGGTGATATCACTTGTGATATTGTTGATAATGTGGAGGCTTCGATGTTTTATAGGGATGGAACGGCGTCGGATCATGATGAGTTTCGGAGGAACCCTTGTTGTTTCTCTGCTGAAGTGAAGAGACCTGGTCACACGATATCAAAAGGGCATAAGAATTATGAGTTGATGCTTAATCTGCAATTGGGGATAAGGTACTCTGTTGGGAAGGAAGCTTCGATGTTGAGAGAGCTTAAACAGAGTGATTTTGATCCGAAGGAAAAGTTCTGGACCAGGTTTCCATCTGAAGGATCCAAGATTACGCCGCCTCATCAATCAGCGGAATTTCGATGGAAGGATTACTGCCCTGTGGTTTTTAGATATTTGAGGAAGCTGTTTCAGGTGGATCCTGCTGATTACATGTTAGCTATATGTGGGGATGATGCCCTCAGGGAGCTTTCCTCTCCCGGGAAAAGCGGGAGCATCTTCTACTTGACCCAAGATGATAGGTTCATGATTAAGACAGTGAAGAAATCTGAAGTCAAGGTGCTTATTCGGATGCTTCGAAGTTATTACCAACATGTGTCTCGATATGAGAATTCATTTGTGACTAAATTCTACGGGGTGCACTGTGTCAAACCAATTGGAGGCCAGAAGATCCGGTTCATTGTGATGGGCAATCTTTTCTGCTCTGAATATCCAATTCATAGACGATTCGATTTGAAAGGATCTTCACATGGCCGTACAACTGATAAACCTGAGGAAGAGATCGATGAAACTACCACCCTCAAGGATCTTGATCTCAATTTTGTGTTTCGTGTACAAAGAAACTGGTTCCAGGACCTTATTAAACAGATTGAGCGGGATTGCGAGTTCTTGGAAGCTGAGAAAATTATGGATTATAGTCTCTTGGTTGGCCTTCATTTTCGTGATGATAATACATGTGACAAAATGGGATTGTCACCTTTTGTTTTACGCACTGGCAATCGGGATTCTTATCAGAGTGAGAAATTCATGCGGGGTTATCGCTTTCTTGAAGCAGAGCTACAAGATAGGGATCGAGTTAAATCGGGAAGGAAGTCACTGATTAGGTTAGGAGCCAATATGCCTGCAAGAGCAGAGCGAATGGCTCGGAGGAGTGATTTTGATCAATACACCACTGTTGGAATCAGCCCTTTGACCCCTTATCGCAGTGGGGAGACTTATGACGTCGTTCTATATTTCGGGATTATTGACATTTTGCAAGATTATGATATCAGCAAGAAGCTTGAGCATGCTTACAAGTCCTTGCAAGTTGACCCTACTTCAATCTCTGCTGTTGATCCAAAGCTCTACTCAAAGAGGTTTCGTGATTTTGTAGGGAGAATATTCATTGAAGACAGGTAG 2202 0.4682 MREALACDDHGDVRKKSKPEQEKEEKPSPPAVVAGRSRSQGGGRRVTPASVTVVPNVGSVVERFLPNGDFYVGSFSGNVPHGSGKYLWTDGCMYEGEWKRGKASGKGKFSWPSGATYEGEFKSGRMEGFGTFVGSEGDTYRGSWSSDRKHGFGRKRYANGDLYEGWWKRNLQDGQGRYVWKNGNQYVGEWRNGVISGKGELVWPNGNRYEGQWDNGVPKGQGVMKIQHCLNLKTSGGFSWKDNFSLAMRKRSSVDVTSGRGSVNEKSFPRICIWESEGEAGDITCDIVDNVEASMFYRDGTASDHDEFRRNPCCFSAEVKRPGHTISKGHKNYELMLNLQLGIRYSVGKEASMLRELKQSDFDPKEKFWTRFPSEGSKITPPHQSAEFRWKDYCPVVFRYLRKLFQVDPADYMLAICGDDALRELSSPGKSGSIFYLTQDDRFMIKTVKKSEVKVLIRMLRSYYQHVSRYENSFVTKFYGVHCVKPIGGQKIRFIVMGNLFCSEYPIHRRFDLKGSSHGRTTDKPEEEIDETTTLKDLDLNFVFRVQRNWFQDLIKQIERDCEFLEAEKIMDYSLLVGLHFRDDNTCDKMGLSPFVLRTGNRDSYQSEKFMRGYRFLEAELQDRDRVKSGRKSLIRLGANMPARAERMARRSDFDQYTTVGISPLTPYRSGETYDVVLYFGIIDILQDYDISKKLEHAYKSLQVDPTSISAVDPKLYSKRFRDFVGRIFIEDR* 734
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g01561 733 ProSiteProfiles Phosphatidylinositol phosphate kinase (PIPK) domain profile. 325 729 IPR002498 GO:0016307|GO:0046488
Rops9g01561 733 Coils Coil 548 568 - -
Rops9g01561 733 FunFam Phosphatidylinositol 4-phosphate 5-kinase 101 145 - -
Rops9g01561 733 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 65 170 - -
Rops9g01561 733 MobiDBLite consensus disorder prediction 1 29 - -
Rops9g01561 733 Gene3D Phosphatidylinositol Phosphate Kinase II Beta 318 499 IPR027484 -
Rops9g01561 733 PANTHER PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE 79 729 IPR023610 -
Rops9g01561 733 Pfam Phosphatidylinositol-4-phosphate 5-Kinase 417 727 IPR002498 GO:0016307|GO:0046488
Rops9g01561 733 Pfam MORN repeat 140 161 IPR003409 -
Rops9g01561 733 Pfam MORN repeat 117 139 IPR003409 -
Rops9g01561 733 Pfam MORN repeat 209 224 IPR003409 -
Rops9g01561 733 Pfam MORN repeat 186 208 IPR003409 -
Rops9g01561 733 Pfam MORN repeat 163 184 IPR003409 -
Rops9g01561 733 Pfam MORN repeat 71 93 IPR003409 -
Rops9g01561 733 Pfam MORN repeat 94 115 IPR003409 -
Rops9g01561 733 PIRSF PIP5K_plant 14 236 IPR017163 GO:0005524|GO:0016308
Rops9g01561 733 PIRSF PIP5K_plant 230 733 IPR017163 GO:0005524|GO:0016308
Rops9g01561 733 SMART morn 207 228 IPR003409 -
Rops9g01561 733 SMART morn 184 205 IPR003409 -
Rops9g01561 733 SMART morn 138 159 IPR003409 -
Rops9g01561 733 SMART morn 161 182 IPR003409 -
Rops9g01561 733 SMART morn 115 136 IPR003409 -
Rops9g01561 733 SMART morn 69 90 IPR003409 -
Rops9g01561 733 SMART morn 92 113 IPR003409 -
Rops9g01561 733 MobiDBLite consensus disorder prediction 1 48 - -
Rops9g01561 733 CDD PIPKc_AtPIP5K_like 332 728 - -
Rops9g01561 733 SMART PIPK_2 358 730 IPR002498 GO:0016307|GO:0046488
Rops9g01561 733 Gene3D - 73 123 - -
Rops9g01561 733 Gene3D - 124 168 - -
Rops9g01561 733 Gene3D - 169 234 - -
Rops9g01561 733 FunFam Phosphatidylinositol 4-phosphate 5-kinase 318 499 - -
Rops9g01561 733 SUPERFAMILY SAICAR synthase-like 328 729 - -
Rops9g01561 733 Gene3D - 500 729 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g01561 Rops-Chr9 26976831 26981688 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g01561 28 732 Acyl Lipid Metabolism Gene Families AT1G21980 74.687 0.0 1092
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g01561 K00889 - gmx:100810432 1264.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops9g01561 9 26976831 26981688 Rops9g01561 9 26976831 26981688 ECH