Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g01544 ATGGCGAGAAAAACCAGCAACTGTGCCATATGCGAGAATTCGAATCAAGCTTCGATATGTTCTATTTGCGTCAACTATAGGTTGAATGAGTACAACACTTCTTTGAAGTCACTGAAAGAGCGTCGAGATTCGTTGTACTCAAAATTGAGCGAAGTTCTTGTTCGCAAGGGAAAGGGAGATGATCAAATAAATTGGAGAGTGCTTCAACATGAAAAGCTTGCAAGGTTGAGGGAGAAGCTCTGTCATACTAAAGAACAAGTTACTCAAGGAAGATCTAAGATAGGGACCATGTCTGCTGATCTGAAACTTAAATATGGAGTGCTTGAATCTGCCCTTTCTACGTTGGAAAAGAATCGAGTGGAACAACTGGAGAAGTTCTACCCTAATCTTATATGCACCCAGAGCTTAGGGCATGTGGCAATTACCTCTGAGCGTCTTCATAAACAGTCTGTGGTCATAAAACAGATATGCAAGTTATTTCCACAACGCCGGGTGGTCATAGAGGGAGAGAGGAGGGATGGTTGTAGTGGTCAATATGATCAAATTTGCAATGCACGCTTGCCAAGAGCACTTGATCCCCACTCTGTTCCATCAGAAGAGCTTTCTGCTTCTTTGGGATACATGGTGCAACTTCTAAATCTTGTTGTTCACAACTTGGCTGCGCCAGCACTTCATAACTCAGGTTTTGCGGGTTCGTGCTCTCGAATATGGCAACGGGATTCTTATTGGGATGCACGTCCTTCCTCAAGGAGCAATGAATATCCACTTTTTATACCTCGCCAAAATTATTGCTCAACTGGTGGGGAAAACTCATGGTCTGATAAAAGCTCAAGCAATTTCGGTGTGGCTTCAATGGAGTCTGACAGGAGGCCTCGCCTGGATTCATCTGGGAGTAGTAGCTTTAACTATTCTTTAGCTTCTTCACATTCTGTTCAAACGCACAAAGATCTGCAGAAAGGAATTTCACTTTTAAAGAAAAGTGTAGCATGCATCACAGCTTACTGTTATAACTCCCTATGTTTGGATGTCCCTTCTGAGGCATCTATGTTTGAAGCATTTGCAAAGTTATTGGCTACACTCTCATCCTCCAAGGAAGTTCGATCTGTTTTTTCTTTGAAAATGGCTCGCTCTAGGACATGTAAGCAAGTTCACCAATTGAACAAATCTGTTTGGAATATGAATTCTGCTATTTCATCAACTACTTTGCTGGAAAGTGCACATTCTGTGCCCACAACGAGGATTGAAAATTATCTGCCAAGTTCTGCTGCTAGTTTTCTTTATGCCACGGATTTATCTGATGGAAAAAATGAGTGCCTAATTGAAGGGTGGGATATTGTTGAGCATCCCACTTTTCCTCCCCCACCATCACAAAGTGAGGATGTTGAGCACTGGACTCGAGCCATGTTCATAGATGCTAAAAAGAAGTGA 1428 0.4237 MARKTSNCAICENSNQASICSICVNYRLNEYNTSLKSLKERRDSLYSKLSEVLVRKGKGDDQINWRVLQHEKLARLREKLCHTKEQVTQGRSKIGTMSADLKLKYGVLESALSTLEKNRVEQLEKFYPNLICTQSLGHVAITSERLHKQSVVIKQICKLFPQRRVVIEGERRDGCSGQYDQICNARLPRALDPHSVPSEELSASLGYMVQLLNLVVHNLAAPALHNSGFAGSCSRIWQRDSYWDARPSSRSNEYPLFIPRQNYCSTGGENSWSDKSSSNFGVASMESDRRPRLDSSGSSSFNYSLASSHSVQTHKDLQKGISLLKKSVACITAYCYNSLCLDVPSEASMFEAFAKLLATLSSSKEVRSVFSLKMARSRTCKQVHQLNKSVWNMNSAISSTTLLESAHSVPTTRIENYLPSSAASFLYATDLSDGKNECLIEGWDIVEHPTFPPPPSQSEDVEHWTRAMFIDAKKK* 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g01544 475 Pfam Vacuolar sorting 38 and autophagy-related subunit 14 8 366 IPR018791 -
Rops9g01544 475 Coils Coil 28 48 - -
Rops9g01544 475 PANTHER UV RADIATION RESISTANCE-ASSOCIATED GENE PROTEIN 7 396 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g01544 - - gmx:100776426 896.345
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops9g01544 9 26507849 26517703 Rops9g01544 9 26507849 26517703 ECH