Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g01509 ATGGCCGGTGGGGGATTCGCCGCTGATGCTTCAGCTAATGGACTTAACGGCAAGATAACACTCTCAGTTGTCATAACTTGCATCGTTGCTGCATCTGGTGGACTCATTTTTGGATATGACATCGGAATTTCAGGAGGTGTCACTACGATGAAGCCATTTCTTGAAAAATTCTTCCCAATAATATTGAGAAAGACTGCAAGCGCCGAAACAAACATGTACTGTGTGTATGACAGTGAGGTGTTGACATTATTCACGTCCTCTCTTTATCTAGCGGGGCTAGTGTCCTCTCTCCTTGCCAGCAGAGTCACGACGGCGTTGGGTCGGAGAAACACCATGATATTGGGTGGCTGCATCTTTTTCGCCGGTGGTGCCATTAATGCTGTAGCTGAAAACATTGCTATGCTCATCTTGGGCCGTATCTTCCTCGGTTTTGGGGTCGGTTTCACCAATCAAGCTACACCAGTATACCTTTCGGAAATAGCTCCACCAAAATGGCGAGGTGCATTCAACACAGGCTTTCAATTCTTCATAGGAATAGGCGTAGTGGCAGCAAACTGCATAAACTACGGCACCGCCAGGCACACATGGGGCTGGCGTCTGTCCCTTGGCCTTGCCATTGTTCCCGCAACAGTAATGACACTTGGTGCCTTCTTAATACCCGACACACCCAGCAGCTTGGTAGAACGTGGCAAGATAGACCAAGCAAGACGCACCTTGAGCAAAGTTAGAGGTCCTACAATTGATGTGGAACCTGAATTGGAACAAATGATTAGATGGTCACAAGTTTCAAAAGCAATGGAGCAGGAGAGCTTTTTTACCATATTTGAGAAGAAGTATCGACCTCAATTGGTGATGGCATTTGCTATACCAATATCTCAGCAGCTTACTGGGGTCAACATTGTTGCATTCTATGCTCCTAACCTCTTTCAATCTGTGGGTTTTGGCAACGACTCGGCATTACTTTCAGCCATTGTACTGGGAGTTGTTAACCTTGTTTCTATCCTGGTTTCTGCTGCTATTGTTGATCGATTTGGTCGAAGATTCTTGTTCATAGTGGGTGGCATTGGAATGCTTGTCTGTCAGATTGCGGTAGCTGTTGTGCTAGCACTGGCGAGTGGTGTTCATGGTACAGAGCACATGTCAAAGGGCAACGCTATACTGGTACTGGTGCTCTTGTGCTTCTACGCTGCAGGTTTTGGTTGTTCATGGGGCCCTCTTTGCTGGCTAATTCCAAGTGAGATTTTCCCCTTAAAGATCAGATCCACAGGGCAAAGCATAGCCATTGCCATGCAGTTCTTAACCATATTTGTTTTATCCCAGACATTCTTGACAATGTTATGCCACTTTAAGTTCGGGGCTTTCCTATTCTTTGCGGGTTGGATTGCAGTGATCACCATCTTTATTATATTATTCTTGCCCGAGACCAAAGGAATTCCTTTGGATTCAATGTATACGATATGGGGCAAACACTGGTATTGGTGCCGGTTTATTGTTGAAGGACAAGTTAACCATGAAAATCTTCCATGA 1527 0.4565 MAGGGFAADASANGLNGKITLSVVITCIVAASGGLIFGYDIGISGGVTTMKPFLEKFFPIILRKTASAETNMYCVYDSEVLTLFTSSLYLAGLVSSLLASRVTTALGRRNTMILGGCIFFAGGAINAVAENIAMLILGRIFLGFGVGFTNQATPVYLSEIAPPKWRGAFNTGFQFFIGIGVVAANCINYGTARHTWGWRLSLGLAIVPATVMTLGAFLIPDTPSSLVERGKIDQARRTLSKVRGPTIDVEPELEQMIRWSQVSKAMEQESFFTIFEKKYRPQLVMAFAIPISQQLTGVNIVAFYAPNLFQSVGFGNDSALLSAIVLGVVNLVSILVSAAIVDRFGRRFLFIVGGIGMLVCQIAVAVVLALASGVHGTEHMSKGNAILVLVLLCFYAAGFGCSWGPLCWLIPSEIFPLKIRSTGQSIAIAMQFLTIFVLSQTFLTMLCHFKFGAFLFFAGWIAVITIFIILFLPETKGIPLDSMYTIWGKHWYWCRFIVEGQVNHENLP* 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g01509 508 ProSitePatterns Sugar transport proteins signature 1. 337 354 IPR005829 GO:0016020|GO:0022857|GO:0055085
Rops9g01509 508 NCBIfam sugar porter family MFS transporter 19 481 IPR003663 GO:0016020|GO:0022857|GO:0055085
Rops9g01509 508 PANTHER SOLUTE CARRIER FAMILY 2, FACILITATED GLUCOSE TRANSPORTER 15 497 IPR045262 GO:0015144
Rops9g01509 508 SUPERFAMILY MFS general substrate transporter 28 481 IPR036259 -
Rops9g01509 508 Gene3D MFS general substrate transporter like domains 16 490 IPR036259 -
Rops9g01509 508 CDD MFS_STP 29 474 IPR044778 GO:0015145|GO:0015749
Rops9g01509 508 ProSiteProfiles Major facilitator superfamily (MFS) profile. 26 476 IPR020846 GO:0022857
Rops9g01509 508 ProSitePatterns Sugar transport proteins signature 2. 141 166 IPR005829 GO:0016020|GO:0022857|GO:0055085
Rops9g01509 508 FunFam Sugar transport protein 13 16 490 - -
Rops9g01509 508 Pfam Sugar (and other) transporter 27 487 IPR005828 GO:0016020|GO:0022857|GO:0055085
Rops9g01509 508 PRINTS Sugar transporter signature 293 303 IPR003663 GO:0016020|GO:0022857|GO:0055085
Rops9g01509 508 PRINTS Sugar transporter signature 136 155 IPR003663 GO:0016020|GO:0022857|GO:0055085
Rops9g01509 508 PRINTS Sugar transporter signature 412 424 IPR003663 GO:0016020|GO:0022857|GO:0055085
Rops9g01509 508 PRINTS Sugar transporter signature 389 410 IPR003663 GO:0016020|GO:0022857|GO:0055085
Rops9g01509 508 PRINTS Sugar transporter signature 34 44 IPR003663 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g01509 Rops-Chr9 25391635 25405720 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g01509 50 496 Organic Solute Cotransporters AT1G34580 64.222 0.0 590
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g01509 K24193 - gmx:100783916 840.491
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops9g01509 9 25391635 25405720 Rops9g01509 9 25391635 25405720 ECH