Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g01506 ATGCAGAAGCTAGGATTCCCAATCTCCAAGAGCCTCGACCAATTCAAATCGTTGTACGGTTCCGTATCGGGAACTGCAAAGCCATTATCATCGCTCTCTTCGCGTCCTTCTGCAGATTCTATCGCATCAGGGAGTTTCGCGAATCTGAAGCTCACTGCAGAGAAATTGGTGAAAGAGCAAGCTTCGGTGAAGACTGACCTTGAAATTGCGAATACTAAGCTTAAGAAATCGTTGGAGCATATCCATGCATTAGAAGAAAAATTGCAGAATGCCTTTAACGAAAATGCGAAGCTCAAGGTCAAGCAGAAGGAAGATGAGAAACTCTGGAAAGGACTGGAATCTAAGTTCTCATCGACTAAGACTGTGTGTGATCAACTTACTGAGACTTTACAACAGTTGGCTGGTCAAGTTCAGGATGCTGAGAAAGATAAGGAAACATTGGAAAATAAACTGTCAGCAAGTTCAGAAGCTCTTGATAACTTGAATAAACAGATGGATTGTTTGTCTTTGAAGCTAGATTCAGCACAGGAAACAATTAAAACTCGTGATAATGAGCTCGAGAAGCTCAAATTTGCTACAGAAGAAAGGGAGAAGTTTCACAGAGATGAGCTGTGCAGAGCTGCCAATGTTATACAAGAGAAGGATGCTACTATAAAGAATTTAGAAGAAATGTTAACAACTAGTAGATTGGATACAGAGAATTTGAACTCAAAGATGGGAGAGGTTCACCATCAGTTAAAAGTCAAAGAAGATGAAATTATGCATCATATAACCAGTCAAGAGACACTGAAGAAAGAAAAGGGTGATCTTCAATTGTGTAATGCTAAGCTTGCTGAAAAGCTTGACATGTCACTTCAGGAAATCAAAAACCTTGAAGGATTAATCCAGGTGGTGACTGCACATATGTTAAATTTAGACAAAGAAAGCTTGAACCTTTTGAGCAAGTTTGATGAAATGAACTCTCTCTATGCTTCTTGCTTCAAGTTGGTCCAGCAGGAGAGAGAAACTTTTTCTAAGCATGCTCAAAACCAGTATGGTGAGCTTAATAATAAATTCTTGATATTGGCATCAGAAAAGGATGCAATTCAAATGAAAAATCATGAGTTAAGCAATAGTGTGAACGAACTTCAGAAAGTGCAAGAGTCTACTGTAGCCCAGCATAAAGAGGACTGTCGGTTAGCAGCTGCGAGAATTCAGCATTTGGAGTCAGAAGCTGAAACTTTAATCTCAAAAAAGGCAGAAGCAGAGGTCATAATTTCCAAATTAGAGGAGAAAGTTCAAATTCTGTCAGAAAGTTCTAGATCATCAGAGAACCAAATGCAAAGTTTACTTCTGAAAGTTTCAGCATCAGAGACTGAAAGCAAAGAAAATATGGAAAGACTGCAGGCAGAGATATTAAAAAAATCAGAGGAAATAGATACTTTGCAAAAGGAGAGAATGAAACTAGAGCAGCATGCAGATTCTCTTGATAAAGAAGTCAGTCAGCTTCATAATTTCTTAGAGGAAAAAGAACAGTATATATTACAGTATAAGGAACAGGAAAAGAAGCTGGAAGATCAAATCACTGAGAATCAGTCATTATTGACTGCTGCTGAAAGTAAACTTTCAGAAGCTAGAAAGCAATATGATCAAATGGTAGAGAATAAGCAGTTGGAATTATCAAAGCATTTGAAAGAAATATCTCAGAGAAATGATCAGGCTATTAATGACATTAAGAGGAAGTATGAGTTGGAGAAGATGGAAATTGTCAACATGGAAAAAGACAAGGCTGACAAAGCTATTGCAGAAATTGAGGCAAGGTGTGATCAAAAACTTGCAGAGTGCAAAGAAGAATCAAGACAGCAGTTGATGCGCATTCAGGAGGAACACACTGGGCTGGTTGCACAAATGCAGCAAGAGCATAACAATAGGCAATTAAACCTGATAGCTGAACACAGTGAACAGCTAAAGCGTACCCAACTGCAAGCTGAAAATGAACTGAGAGAGAAAACAATGTTCCTAAGGAGTGACCATGAAGCTCAGATTAAAGCATTGAGATGTGAACTTGAAGATGAGTGTCGGAAGCTGGAAGAGGAGTTGCATCTTCAGAAATCAAAAGAAGACAGGCAAAGGGCTTTGTTGCAGTTGCAGTGGAAAGTGATGAGTGACAAGCCAAAAGAGGATCAAGAAGTGAATTCAAAACAGGATTACTCCATTTCATCAATTAAAAGGAGGAGTTCTTTTGGTGGCAAAAGAAATCAGCATGACCTGGACTCTCCGTACTTTGAAGCAACAGAAACACCAGTGCCAAAGTTGTTGAAGAAAGTGGAGAACGTGAAAACAGGAAGTGCAATGAGCGTTCCTAAGCATCATAGAAAGGTAACTCGCCATGAATACGAAGTTGAGACTTCTAACGGAAGAACAATCACAAAGAAAAGGAAAACAAGAAGTACTGTCTTGTTTGAGGACCCAAGAAAACAAAAGATAAATACTCCAAAAACAAATACCCCTGGAAGTGTTGTTAAGAACATGAAGGGAGGAGGCCATCCTCATCCTTCAAATATTGGTGATTTGTTTTCAGAAGGGTCTCTGAATCCATATGCAGATGATCCCTATGCATTTGATTAG 2607 0.3897 MQKLGFPISKSLDQFKSLYGSVSGTAKPLSSLSSRPSADSIASGSFANLKLTAEKLVKEQASVKTDLEIANTKLKKSLEHIHALEEKLQNAFNENAKLKVKQKEDEKLWKGLESKFSSTKTVCDQLTETLQQLAGQVQDAEKDKETLENKLSASSEALDNLNKQMDCLSLKLDSAQETIKTRDNELEKLKFATEEREKFHRDELCRAANVIQEKDATIKNLEEMLTTSRLDTENLNSKMGEVHHQLKVKEDEIMHHITSQETLKKEKGDLQLCNAKLAEKLDMSLQEIKNLEGLIQVVTAHMLNLDKESLNLLSKFDEMNSLYASCFKLVQQERETFSKHAQNQYGELNNKFLILASEKDAIQMKNHELSNSVNELQKVQESTVAQHKEDCRLAAARIQHLESEAETLISKKAEAEVIISKLEEKVQILSESSRSSENQMQSLLLKVSASETESKENMERLQAEILKKSEEIDTLQKERMKLEQHADSLDKEVSQLHNFLEEKEQYILQYKEQEKKLEDQITENQSLLTAAESKLSEARKQYDQMVENKQLELSKHLKEISQRNDQAINDIKRKYELEKMEIVNMEKDKADKAIAEIEARCDQKLAECKEESRQQLMRIQEEHTGLVAQMQQEHNNRQLNLIAEHSEQLKRTQLQAENELREKTMFLRSDHEAQIKALRCELEDECRKLEEELHLQKSKEDRQRALLQLQWKVMSDKPKEDQEVNSKQDYSISSIKRRSSFGGKRNQHDLDSPYFEATETPVPKLLKKVENVKTGSAMSVPKHHRKVTRHEYEVETSNGRTITKKRKTRSTVLFEDPRKQKINTPKTNTPGSVVKNMKGGGHPHPSNIGDLFSEGSLNPYADDPYAFD* 869
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g01506 868 Coils Coil 274 294 - -
Rops9g01506 868 Coils Coil 668 688 - -
Rops9g01506 868 Coils Coil 384 439 - -
Rops9g01506 868 Coils Coil 67 101 - -
Rops9g01506 868 Coils Coil 642 662 - -
Rops9g01506 868 MobiDBLite consensus disorder prediction 821 868 - -
Rops9g01506 868 Coils Coil 568 614 - -
Rops9g01506 868 Coils Coil 451 492 - -
Rops9g01506 868 PANTHER SYNAPTONEMAL COMPLEX PROTEIN-RELATED 38 815 - -
Rops9g01506 868 Coils Coil 496 548 - -
Rops9g01506 868 Coils Coil 123 178 - -
Rops9g01506 868 SUPERFAMILY Tropomyosin 80 295 - -
Rops9g01506 868 MobiDBLite consensus disorder prediction 774 799 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g01506 - - gmx:100788684 1394.41
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops9g01506 9 25333085 25346478 Rops9g01506 9 25333085 25346478 ECH