Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g01471 ATGGGTGTCTCATTCCTCTCAACTTGTCCATCTCTGCTTCCACTTGTTACTTATGATGCACCACCCACCACTAGATTCCAACCTCGATCAGTGCCCGTTTGTTGTAATAAGATCAAAATCAATGTTAGTGATGAAGACAAAAATTGGAAACGGAGGGGCGTTCTTAAATGCTTTGGGGCGACAATTGGCTTGGAATTGATAGGAGGCTCTGGATCACTTGTTGGAATGACTAATGCTGCTGACTTGATACAACGCAGACAGCGTTCTGAGTTTCAATCTCAAGTTAAGGGAACACTTTTTGTGGCCATAAAGGGAAATCCTGATCTTGTTCCATCCATACTAACACTGGCTTTAAATGATTCTGTGACTTATGATAAGGCAACAAAATCAGGTGGCCCAAATGGCTCTATACGGTTCAGCTCAGAAATAAGTAGACCTGAAAATAAGGGGCTTTCCGCTGCCATGAGTTTATTAGAGGAAGCGAAAAAGGAGATAGATTCATATTCCAAAGGTGGACCAATTTCCTATGCAGATCTCATCCAGTATGCAGCACAAAGTGCTACCAAGGCTACATTTTTAGCAGCTGCCATTCGCAAATGTGGTGGAAATGAGGAGAAAGGGAATATACTGTACAATGCATATGGATCCAACGGGCAGTGGGGTTTGTTCGATAGGCAATTTGGTAGGGCTGATGCTCAAGACCCAGATCCAGAGGGGAGAGTTCCAATTTGGGAGAAAGCAAGTGTTCAGGAAATGAAAGATAAATTTTCTGCTGTCGGCTTTGGTCCTCGCCAGCTGGCCGTACTGTCTGCATTTTTAGGTCCTGATCAGGCTGCAACAGAAACCTTATTAGCCTCTGATCCGGATGTTGCTCCATGGGTACAAAAATACCAAAGGAGCCGTGAAACAGTTTCTCGGACAGATTATGAGGTTGATCTGATAACCACTTTCACAAAATTGGGTACCTTGGGCCAACAAATCAACTATGAGGCTTATACATATCCTCCCCCAAAGATTGACATTACCAGACTCAAATTGTAA 1041 0.4352 MGVSFLSTCPSLLPLVTYDAPPTTRFQPRSVPVCCNKIKINVSDEDKNWKRRGVLKCFGATIGLELIGGSGSLVGMTNAADLIQRRQRSEFQSQVKGTLFVAIKGNPDLVPSILTLALNDSVTYDKATKSGGPNGSIRFSSEISRPENKGLSAAMSLLEEAKKEIDSYSKGGPISYADLIQYAAQSATKATFLAAAIRKCGGNEEKGNILYNAYGSNGQWGLFDRQFGRADAQDPDPEGRVPIWEKASVQEMKDKFSAVGFGPRQLAVLSAFLGPDQAATETLLASDPDVAPWVQKYQRSRETVSRTDYEVDLITTFTKLGTLGQQINYEAYTYPPPKIDITRLKL* 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g01471 346 FunFam thylakoid lumenal 29 kDa protein, chloroplastic 78 246 - -
Rops9g01471 346 Pfam Peroxidase 99 270 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops9g01471 346 PRINTS Plant ascorbate peroxidase signature 128 138 IPR002207 GO:0004601|GO:0006979|GO:0020037
Rops9g01471 346 PRINTS Plant ascorbate peroxidase signature 142 166 IPR002207 GO:0004601|GO:0006979|GO:0020037
Rops9g01471 346 PRINTS Plant ascorbate peroxidase signature 110 125 IPR002207 GO:0004601|GO:0006979|GO:0020037
Rops9g01471 346 SUPERFAMILY Heme-dependent peroxidases 78 327 IPR010255 GO:0004601|GO:0006979|GO:0020037
Rops9g01471 346 CDD plant_peroxidase_like 95 335 - -
Rops9g01471 346 Gene3D - 247 311 - -
Rops9g01471 346 PANTHER THYLAKOID LUMENAL 29 KDA PROTEIN, CHLOROPLASTIC-RELATED 59 337 IPR044831 GO:0004601|GO:0034599
Rops9g01471 346 Gene3D - 82 246 - -
Rops9g01471 346 FunFam Thylakoid lumenal 29 kDa protein, chloroplastic 247 311 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g01471 K00434 - gmx:100795192 609.372
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops9g01471 9 24477670 24483201 Rops9g01471 9 24477670 24483201 ECH