Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g01470 ATGCAAAGACGCAAGTGGATTTCGTTGGTACTGTTGAGGAAGTTGCTCACAGCAGCTATATGCTCAATAACGTTTGTGGCTCTCTTCTCTGTTCATGTTCACATTGTCCCTTCCTCAAAAGATCACAAGTTCAATGACAAGATCATCACGCCTCAGGATCTGCAAAGCTGGACACGAGAGCTTGCTCCGCCCCATTTATCCAAAGCTCCCCTTCCTACTCCCAAGTTGAATGGTTCAAGAGGGGATTCGGCTTATGAGAAGCTGTGGAAGCCTCCGTCCAATCGTGGGTTTCTGCCCTGTACAAAGCCTACTCCTAATTACACCACTCCTGTGGAGTCACGAGGATATCTTTTAGTTCATACAAATGGTGGGCTCAACCAAATGCGTTCTGGGATATGTGATATGGTTTCTGTAGCTCGTATCATAAATGCCACTCTTGTAATTCCAGAACTTGATAAAAGATCTTTTTGGCAAGATACTAGCAATTTCTCTGATATTTTTGATGAAGAGCATTTTATTAATTCTCTAGCTAATGATGTAAAAATCATTAAGAAGCTTCCCAAAGAACTGGTTAATGCAACCAATATGGTCAAGCAATTCATAAGCTGGTCTGGCATGTATTACTATGAGAATGAGATTGCTAAGTTGTGGGAAGATTACCAAGTTATTCGTGCCTCCAAATCAGATTCACGGTTAGCAAACAACAATCTACCTCCAGACATTCAAAAGCTTCGCTGCCGAGCTTGTTATGAAGCTCTTCGATTCTCTCCTCGCATTGAACAAATGGGAAAATTGTTGGTGGAGAGGATGAGGTCATTTGGTCCTTATATTGCATTGCATTTACGTTATGAGAAGGATATGCTTGCATTTAGTGGGTGCACACATGATTTATCTCCAGATGAAGCTGAAGAGCTACGGATGATCAGAGAGAACACTTCCTATTGGAAAATAAAGGATATTGATCCCATAGAACAGAGGTCCAAAGGGTTTTGCCCCTTAACTCCAAAGGAAGTTGGAATTTTTCTTACTGCTCTCGGATACCCATCAAAGACTCCAATATATATAGCTGCTGGAGAGATATATGGAGGCGAGTACCCTATGGTTGAACTGTGTTCCCATTATCCATTGTTAATGAGCAAGGAGAAGTTGGCATCCATCGAGGAGCTTGAACCCTTTTCTAGTCACGCATCTCAAATGGCTGCTCTTGACTATATTGTATCTATTGAAAGTGATGTATTTATACCTTCTTATTCCGGAAACATGGCAAGGGCTGTTGAAGGTCATCGCCGTTTTCTTGGACGTGGAAGAACGATATCTCCAGACAGGAAAGCCCTTGTTCGTCTGTTTGATAAACTGTATCAGGGAAGAATGACCGAGGGGAAAAAACTATCAAATAGGATTATTGATCTCCACAGAAGACGACTTGGCTCTCCAAGGAAGAGGAAAGGGCCAATTTCTGGAACAAAGGGCATGGACAGATTTCGGTCAGAAGAAGCTTTTTATGCTAATCCCTTACCTGATTGTTTATGCCGGAGGACAGAACCACCACCTTTAAACATCTCTCACATTAAGTAG 1575 0.4216 MQRRKWISLVLLRKLLTAAICSITFVALFSVHVHIVPSSKDHKFNDKIITPQDLQSWTRELAPPHLSKAPLPTPKLNGSRGDSAYEKLWKPPSNRGFLPCTKPTPNYTTPVESRGYLLVHTNGGLNQMRSGICDMVSVARIINATLVIPELDKRSFWQDTSNFSDIFDEEHFINSLANDVKIIKKLPKELVNATNMVKQFISWSGMYYYENEIAKLWEDYQVIRASKSDSRLANNNLPPDIQKLRCRACYEALRFSPRIEQMGKLLVERMRSFGPYIALHLRYEKDMLAFSGCTHDLSPDEAEELRMIRENTSYWKIKDIDPIEQRSKGFCPLTPKEVGIFLTALGYPSKTPIYIAAGEIYGGEYPMVELCSHYPLLMSKEKLASIEELEPFSSHASQMAALDYIVSIESDVFIPSYSGNMARAVEGHRRFLGRGRTISPDRKALVRLFDKLYQGRMTEGKKLSNRIIDLHRRRLGSPRKRKGPISGTKGMDRFRSEEAFYANPLPDCLCRRTEPPPLNISHIK* 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g01470 524 PIRSF UCP009360 1 514 IPR024709 -
Rops9g01470 524 PANTHER OS02G0726500 PROTEIN-RELATED 13 511 - -
Rops9g01470 524 Pfam GDP-fucose protein O-fucosyltransferase 116 431 IPR019378 -
Rops9g01470 524 FunFam O-fucosyltransferase 28 247 441 - -
Rops9g01470 524 CDD O-FucT_plant 116 437 IPR024709 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g01470 Rops-Chr9 24470571 24475886 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g01470 16 512 Miscellaneous Gene Families AT1G22460 61.255 0.0 680
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g01470 - - gmx:100795727 949.118
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops9g01470 9 24470571 24475886 Rops9g01470 9 24470571 24475886 ECH
Rops9g01470 9 24470571 24475886 Rops10g01761 10 32885973 32890253 PCT