Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g01425 ATGGTGTGGCCAATTCGATCCAGAATGAGTTCACTTCTCAGATCAAAGGCACCTTTAGTGTGTTCATACCTCCATGGAGAATCTTGGTGTTGCTTACCCTTTTCTGGTCCAATCAGTTCCTCTGTGATTTCCTCCTCCACAACAAGGCCTTGGCCAAAATTTATGAATTGGGTAAAAAGGGAAGGGTGCCATTCAGCAGCAGCAGCAGAATTGCCTTCATTCAAGGAGAAACAAGAACAACCAGTGGTTCCAAATAATTCTCTCAGACTCGGTCAAGAAAACAAAGGTCTTAATGTAGGGAATAATATGGCTGAAACTGACGGCCACCAGAATTCATTTGGTTTGATGAAACAGAGGTTTCTAAGTTTCAAGAACCAAAAATATATAAAAGAGTTGGAGCATTTTCAAGCTCTTGCTGAAGTACAATCTCCAAAGTTTTTGGTAATTGCTTGTGCAGATTCTAGGGTATGCCCCTCTAACATATTAGGATTCCAACCTGGAGAAGTCTTTATGATTCGTAACATTGCCAATCTTGTACCTGTGATGAAGAGTGGACCATCAGAGTGTAATGCTGCTCTTCAGTTTGCAGTAACTACTCTTCAGGTTGAGAATATATTAGTCATTGGTCATAGTAGCTGTGCTGGAATTGAAGCTCTGATGAGTATGCAAGAAGATGCAGAATCAAGAAATTTCATACACAAGTGGGTTGCCAATGGGAAAGTTGCCAAATTGAGAACAAAAGCTGCCACAGCTCATCTTAGCTTTGATCAGCAATGCAGATTCTGTGAGAAGGAATCTATTAACCAATCATTATTGAACTTGCTCAGTTATCCTTGGATAGAAGAAAGAGTGAGAAAAGAGTTGCTTTCTTTTCATGGAGGATATTATAATTTCTCCAATTGCTCATTTGAGAAATGGACCCTTGATTTTAAAGAATGCAATGTTAAAGAAGGAGGAAGCAGTTATGCTGTCAAAGAACAAGAATTCTGGTGCTGA 996 0.3966 MVWPIRSRMSSLLRSKAPLVCSYLHGESWCCLPFSGPISSSVISSSTTRPWPKFMNWVKREGCHSAAAAELPSFKEKQEQPVVPNNSLRLGQENKGLNVGNNMAETDGHQNSFGLMKQRFLSFKNQKYIKELEHFQALAEVQSPKFLVIACADSRVCPSNILGFQPGEVFMIRNIANLVPVMKSGPSECNAALQFAVTTLQVENILVIGHSSCAGIEALMSMQEDAESRNFIHKWVANGKVAKLRTKAATAHLSFDQQCRFCEKESINQSLLNLLSYPWIEERVRKELLSFHGGYYNFSNCSFEKWTLDFKECNVKEGGSSYAVKEQEFWC* 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g01425 331 SUPERFAMILY beta-carbonic anhydrase, cab 108 312 IPR036874 GO:0004089|GO:0008270
Rops9g01425 331 CDD beta_CA_cladeB 119 306 IPR045066 GO:0004089|GO:0008270
Rops9g01425 331 ProSitePatterns Prokaryotic-type carbonic anhydrases signature 1. 151 158 IPR015892 GO:0004089|GO:0008270|GO:0015976
Rops9g01425 331 FunFam Carbonic anhydrase 108 315 - -
Rops9g01425 331 SMART Pro_CA_2 139 307 IPR001765 GO:0004089|GO:0008270
Rops9g01425 331 PANTHER CARBONIC ANHYDRASE 90 319 IPR001765 GO:0004089|GO:0008270
Rops9g01425 331 Gene3D Carbonic anhydrase 103 316 IPR036874 GO:0004089|GO:0008270
Rops9g01425 331 Pfam Carbonic anhydrase 147 300 IPR001765 GO:0004089|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g01425 Rops-Chr9 23459484 23462529 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g01425 K01673 - gmx:100812124 513.842
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops9g01425 9 23459484 23462529 Rops9g01425 9 23459484 23462529 ECH