Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g01414 ATGGCTTTGAATTCCGAATTGGTGCGAACCGTTGAGTCGGTGCTGGGAGTTTCGGTTTCGGATTCGTTGGTGTTGATAGTGACCACTTCCGTGGCGGTGGTGATTGGACTTCTGGTTTTGGTGTTGAAGATATCTTCGGATCGGAGCAAGGAACCGAAGCCAATGGCAGTGCCAAAGTTGCTGGTGAAGGAAGTAGAAGAAGAAATCGACGTCGCTTTTGGGAAGACCAAGGTTACCGTTTTCTTTGGTACTCAAACTGGTACTGCTGAGGGCTTTGCTAAGGCTTTGGCTGAGGAGATCAAGGCAAGGTACGAAAAAGCAGCTATCAAAGTTGTTGACCTGGATGACTATGCAATGGATGATGATCAATATGAGGAGAAGCTGAAGAAAGAGACACTTGCATTTTTCATGTTGGCAACATATGGAGATGGAGAACCAACAGACAATGCTGCAAGATTCTACAAATGGTTTACTGAGGGTAAAGATGAGAGGGGTTCCTGGCTTCAACAGCTCACCTATGGCGTTTTTGGCTTAGGTAACAGGCAATATGAACATTTTAATAAGATAGGTAAAGTGGTTGATGAAGAACTCAGTGAACAAGGTGCAAAGCGTCTTGTTCCATTGGGGCTAGGTGATGATGATCAGTCCATTGAGGATGATTTTGTTGCTTGGAAGGAATCTCTGTGGCCTGAGTTGGATCCATTGCTCCGAGATGAGGATGATGTAAATACCGCCTCTACTCCATACAAGGCTGCGATTCCTGAATATCGAGTGGTTATTCATAACCCCACTGTCACATGTGATGATAATCACTTAAATATGGCAAATGGGAATGCTATGTTTGATATTCATCATCCTTGCAGGGTTAACGTTGCTGTACAAAGAGAGCTTCACAAACCTGAGTCTGACCGCTCTTGCATACATTTGGAGTTTGACATATCAGGGACTGGCATAACATTACTTTGTATTCTTGTGTATGCAGCCCCTCACTTACAACCTCGTTATTATTCTATTTCATCCTCGCCTAGGTTTGCCCCACAAAGGGTACATGTAACTTGTGCATTGGTGTATGGTCCGACTCCTACCGGAAGAATTCACAAAGGAGTATGTTCAACCTGGATGAAGAATGCTATTCCCCTAGAGAAAAGCCGTGACTGTAGTTGGGCTCCTATTTTTGTTAGGCCATCAAATTTCAAGTTACCAGTTGACCATTCTATTCCTATTATTATGGTTGGACCTGGTACTGGCTTGGCACCTTTCAGAGGATTTTTACAGGAAAGATTGGCCCTCAAAGAGGATGGTGTTCACTTAGGTCCTGCAGTACTCTTCTTTGGATGTAGGAATCGTCGAATGGATTTTATTTATGAGGATGAGCTAAAGAATTTTGTGGAACAAGGTGCTTTGTCAGAGTTGATAGTCGCGTTCTCTAGAGAGGGACCTGAAAAGGAGTATGTTCAAAACAAGATGATGGATAAAGCAGCAAATCTGTGGAGTTTGATTTCTCAGGGAGGTTATCTTTATGTCTGTGGTGATGCTAAGGGTATGGCCAGAGATGTTCATCGGACTCTTCATACCATTGTCCAGCAGCAGGAAAATGTGGACTCTTCAAAGGCAGAGGCTATAGTGAAAAAACTCCAGATGGATGGACGTTACCTCAGAGATGTCTGGTAA 1671 0.4375 MALNSELVRTVESVLGVSVSDSLVLIVTTSVAVVIGLLVLVLKISSDRSKEPKPMAVPKLLVKEVEEEIDVAFGKTKVTVFFGTQTGTAEGFAKALAEEIKARYEKAAIKVVDLDDYAMDDDQYEEKLKKETLAFFMLATYGDGEPTDNAARFYKWFTEGKDERGSWLQQLTYGVFGLGNRQYEHFNKIGKVVDEELSEQGAKRLVPLGLGDDDQSIEDDFVAWKESLWPELDPLLRDEDDVNTASTPYKAAIPEYRVVIHNPTVTCDDNHLNMANGNAMFDIHHPCRVNVAVQRELHKPESDRSCIHLEFDISGTGITLLCILVYAAPHLQPRYYSISSSPRFAPQRVHVTCALVYGPTPTGRIHKGVCSTWMKNAIPLEKSRDCSWAPIFVRPSNFKLPVDHSIPIIMVGPGTGLAPFRGFLQERLALKEDGVHLGPAVLFFGCRNRRMDFIYEDELKNFVEQGALSELIVAFSREGPEKEYVQNKMMDKAANLWSLISQGGYLYVCGDAKGMARDVHRTLHTIVQQQENVDSSKAEAIVKKLQMDGRYLRDVW* 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g01414 556 SUPERFAMILY Riboflavin synthase domain-like 266 397 IPR017938 -
Rops9g01414 556 Pfam Flavodoxin 80 224 IPR008254 GO:0010181
Rops9g01414 556 FunFam NADPH--cytochrome P450 reductase 1 400 556 - -
Rops9g01414 556 FunFam NADPH--cytochrome P450 reductase 59 248 - -
Rops9g01414 556 Pfam FAD binding domain 281 319 IPR003097 GO:0016491
Rops9g01414 556 Pfam FAD binding domain 323 373 IPR003097 GO:0016491
Rops9g01414 556 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 397 556 IPR039261 -
Rops9g01414 556 Gene3D Translation factors 333 399 - -
Rops9g01414 556 Gene3D Translation factors 286 319 - -
Rops9g01414 556 PANTHER NITRIC OXIDE SYNTHASE-RELATED 324 556 - -
Rops9g01414 556 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 409 428 IPR001709 GO:0016491
Rops9g01414 556 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 451 462 IPR001709 GO:0016491
Rops9g01414 556 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 505 513 IPR001709 GO:0016491
Rops9g01414 556 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 438 447 IPR001709 GO:0016491
Rops9g01414 556 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 482 498 IPR001709 GO:0016491
Rops9g01414 556 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 334 341 IPR001709 GO:0016491
Rops9g01414 556 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 368 377 IPR001709 GO:0016491
Rops9g01414 556 ProSiteProfiles Flavodoxin-like domain profile. 78 229 IPR008254 GO:0010181
Rops9g01414 556 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 284 401 IPR017927 GO:0016491
Rops9g01414 556 Gene3D - 400 556 IPR039261 -
Rops9g01414 556 SUPERFAMILY Flavoproteins 75 234 IPR029039 -
Rops9g01414 556 Pfam Oxidoreductase NAD-binding domain 410 520 IPR001433 GO:0016491
Rops9g01414 556 Gene3D - 59 246 IPR029039 -
Rops9g01414 556 PRINTS Flavodoxin signature 135 146 IPR001094 GO:0010181
Rops9g01414 556 PRINTS Flavodoxin signature 79 92 IPR001094 GO:0010181
Rops9g01414 556 PRINTS Flavodoxin signature 170 180 IPR001094 GO:0010181
Rops9g01414 556 PRINTS Flavodoxin signature 194 213 IPR001094 GO:0010181
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g01414 Rops-Chr9 23263199 23271876 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g01414 K00327 - gmx:547712 508.449
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops9g01414 9 23263199 23271876 Rops9g01414 9 23263199 23271876 ECH