Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g01400 ATGGAAGCTGTGTCGGATCAAGCCACTAGTATATGCACTCACTGTGATCGAGCTATCCCTGCTGCAAATATTGACTTGCATTATGTTCATTGCGTTCGGAACCTTGAAAAATGCAAAGTTTGTGGTGATATGGTTCCCAAAATAAATGCAGAGGATCACTATTTAAGCACTCATGCCCCGGTTTCCTGTTCATTGTGCAGTGAGACAATGGAGCGTGATATTTTAGATATCCATAAAGGTGAAAATTGCCCTCAAAGGATTGTCACTTGTGAGTTTTGTGAGTTCCCATTGCCAGCAATTGATCTGGCTGAGCATCAGGAAGTATGCGGGAATCGAACGGAACTGTGTCACCTTTGTCACAAATATGTCAGACTTCGTGAAAGATACAGTCATGAAGCTAGGTGCAATGGCATCCAAGATAGTGCTGTGGGCACTTCAAGGAATGTGAGGGAAGCTGAAAGAGGGGAAGGTGCTAGAAGAAGGCAGCAGAATGATTTCTCAACTAAACGTCTTCTTTTCACTATAGCCATCACTGGCATTGCTGTTATACTGGGATCTATTTTTCTACAGAGGAAGGTAGAGGCCAGTGATGTGCATTAG 600 0.435 MEAVSDQATSICTHCDRAIPAANIDLHYVHCVRNLEKCKVCGDMVPKINAEDHYLSTHAPVSCSLCSETMERDILDIHKGENCPQRIVTCEFCEFPLPAIDLAEHQEVCGNRTELCHLCHKYVRLRERYSHEARCNGIQDSAVGTSRNVREAERGEGARRRQQNDFSTKRLLFTIAITGIAVILGSIFLQRKVEASDVH* 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g01400 199 PANTHER TRAF-TYPE ZINC FINGER PROTEIN-RELATED 1 193 - -
Rops9g01400 199 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 58 111 IPR013083 -
Rops9g01400 199 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 4 57 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g01400 Rops-Chr9 22993408 22999070 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g01400 - - gmx:100811867 372.474
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops9g01400 9 22993408 22999070 Rops9g01400 9 22993408 22999070 ECH