Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g01382 ATGGGTACTGGTTGGAGAAGAGCCTTTTGTACTCACGACCCTGAATCCACAAAACGCAGAAGCCATAGTCCCACTCTTTCTTCCCCAGCAAGAAGCTGTGTTAAACTGGGTTTCCTCTCAAACCCCTCCACACCAACACTGCAACAAAATGTAACCAAGTCTAATCTCAAGCTCTCTCTTTTCAAGAACAGCTTCAAATTCAGAAGTAGTTGCGGAATGTGTTTAAATAGTGTGAAGACAGGGCAGGGTACGGCTATTTACACTGCGGAATGCGGTCACGCTTTTCATTTTCCTTGCATCGCTGCCATTGTACGCAGCCACGTCACCGTCGTTTGCCCCGTATGCAACGTGGCATGGAAAGACGTACCATTGCTTCAACAAAACGACGATGTCGTTAAGACCGTTGAAACTGAAACTGAAACCGAAACCAACCACCTTGATCCACCGCGACACCATCAGAAGCATTCCGATTGGGTAAGGTCCTACGACGATGACGAGCCTCTCCTTTCTCCTCTCACCGGCTCTAGCCAAATTGTTACAATTCCAGAAGCCAATGAAGACGCCAAAGAAGAAGATGAAAACGACGACACAGGCGAGTTCCCTGGCTTTTTTGTTAATCCAAAACCTGCATCAGTAAGCCACGGTGAATCGAGGAGCGTTCGGGTGAAGTTGATGCCGGAGTGCGCGGTCATTTCGGTTTCCAAGAGCCACGAGACTTATGCGGTGGTTTTAAGAGTCATGGCTCATCCATCGCCGTCACCACCGCAGCGACCACCGATGGATCTTGTCACGGTGCTTGATGTCGGCAGTACCATGAACGGTGCAAAACTTCAGAAGCTGAAACGCGCGATGCGTTTGGTTATCTCCTCTCTCGGCTCGGCTGACCGGCTCTCCATCGTGGCTTCCTCCAAACGATTATTACCTTTGCGGAGAATGACGGCTCAGGGCCAGCGCGTGGCTCGGTGCAATGTCGATCGGCTCGTCACCGGCGACGGCACCAACATCAGTGAAGCTCTGAGGAAAGCTACGAAGGTTCTCGAAGACAGGAGGGAGAGAAACCCAATCGCTCGCGTAATGCTCCTATCAGACGAAAGGTTTCAAACTGATAATAGCAACGCCAATCAACGAAACTGCTCCAGCCACGTGTCTTCATTCCGGTTCGACCGTATCGAAATTCCGGTTCATTCATTTCGGTTCGGTACCAAAACCGGCTTAACTGACAAACCGCTCGAGGATTGGGTTAGGGGGATATTGAGTGTGGTGGTGCAGGACTTGAGAATTCAGCTTGGCTTTTCGGCGCCGGCTGAAATCAGAGCCGTTTACTCATGCAATGGACGCCCTACGGCGCTGAGCCTGGAAGCGGCTCGGCTCGGCGACTTGTACGGTGAAGAAGAGAGGGAACTGTTGTTGGAGGTGAGAGTGCCCACGTCAACATTGGGGACCCACCACATGATGACTGTGCGGTATGTTTATAAAGACCCGGCTAGCAAAGAGTTAGTATGCGGCAGGGAACACGCGCTTACGGTGTCGCCACCACCAAAGAACGCTCCAATTTCTGGAAGCAGGATGGAGAGGTTAAGGAATGTGTTCATTACGAGCCGAGCTGTAGCCGAGTCGCGGAGACTGGTGGAGCACAATGAGTTTTCAAGTGCTTATCATTTGCTTGACGCGGCTCGAGCGCTTCTGGTGCAGTCAGGCTCGGCTTCGGCTGAGGAGTATGTTCGTGGCTTGGAAGCTGAGCTGGCAGAAGTTTGTTGGCGGAAGCAGCAACGGGAGAGAGAGATGAGTTTGGTTGATAAGAATGGTGAAGAGGTTACACCAACGTCGGCTTGGAGAGCGGCTGAGAAGCTGGCTAAGTTGGCTAAATTGAAGAAGTCGTTGAATAGAGTCAGCGACTTACACGGCTTCGAAAACGCCAGGTCATTGTAG 1929 0.5153 MGTGWRRAFCTHDPESTKRRSHSPTLSSPARSCVKLGFLSNPSTPTLQQNVTKSNLKLSLFKNSFKFRSSCGMCLNSVKTGQGTAIYTAECGHAFHFPCIAAIVRSHVTVVCPVCNVAWKDVPLLQQNDDVVKTVETETETETNHLDPPRHHQKHSDWVRSYDDDEPLLSPLTGSSQIVTIPEANEDAKEEDENDDTGEFPGFFVNPKPASVSHGESRSVRVKLMPECAVISVSKSHETYAVVLRVMAHPSPSPPQRPPMDLVTVLDVGSTMNGAKLQKLKRAMRLVISSLGSADRLSIVASSKRLLPLRRMTAQGQRVARCNVDRLVTGDGTNISEALRKATKVLEDRRERNPIARVMLLSDERFQTDNSNANQRNCSSHVSSFRFDRIEIPVHSFRFGTKTGLTDKPLEDWVRGILSVVVQDLRIQLGFSAPAEIRAVYSCNGRPTALSLEAARLGDLYGEEERELLLEVRVPTSTLGTHHMMTVRYVYKDPASKELVCGREHALTVSPPPKNAPISGSRMERLRNVFITSRAVAESRRLVEHNEFSSAYHLLDAARALLVQSGSASAEEYVRGLEAELAEVCWRKQQREREMSLVDKNGEEVTPTSAWRAAEKLAKLAKLKKSLNRVSDLHGFENARSL* 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g01382 642 ProSiteProfiles VWFA domain profile. 261 363 IPR002035 -
Rops9g01382 642 PANTHER CALCIUM-ACTIVATED CHLORIDE CHANNEL REGULATOR 69 636 - -
Rops9g01382 642 SMART VWA_4 259 435 IPR002035 -
Rops9g01382 642 MobiDBLite consensus disorder prediction 135 158 - -
Rops9g01382 642 SUPERFAMILY vWA-like 256 374 IPR036465 -
Rops9g01382 642 Pfam von Willebrand factor type A domain 262 364 IPR002035 -
Rops9g01382 642 Gene3D von Willebrand factor, type A domain 261 415 IPR036465 -
Rops9g01382 642 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 61 147 IPR013083 -
Rops9g01382 642 SUPERFAMILY RING/U-box 64 122 - -
Rops9g01382 642 SMART ring_2 71 115 IPR001841 -
Rops9g01382 642 ProSiteProfiles Zinc finger RING-type profile. 71 116 IPR001841 -
Rops9g01382 642 Pfam RING-like zinc finger 71 100 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g01382 Rops-Chr9 22635682 22644434 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g01382 - - gmx:100819417 727.628
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops9g01382 9 22635682 22644434 Rops9g01382 9 22635682 22644434 ECH