Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g01101 ATGGTGTGGGGACTCTTCCCTATTGATCCTCTTTCAGGTGAAGATAAGTATTACATTTTCAAAACTGGAATTTACAAAGTTGGTCGGAAAGGTTGTGATGTAATCGTCACTAAAGATAAAGGGGTTTCTCGGGTTCATGCAGAAATAGTTGTTAATACAATGAACATGTTAAATCCTCTACCAAATGAACGTTCTCATTTGTCACCCAGTGTACAAATTAGAGATTGCTCCAAGTATGGAACATTTATTAACAAGAATGTTGGGCCCAAGAAAAATGTTCATGAGCTACCAAACAAAGAAGCAGCATTACAGGATGGTGACCTTGTTACTTTTGGCACTGGCAATGCTACCTACAAGTTTAGCTATGTTCCCCTCAATTTTTTCATCTGTTCCCTGAATAAAGTGGATCAAGATCTTGAAGAGAAAATTTCATCAATTGGTGCTAGTATTACTCATTCCTTAGGTGAAGAGTGCACACATGTGCTGGTAGATCAACTCATGCCCTTGAAGAAGGATCTAGTTGATGCTGTGGTGGCCAAAAAATCTTGTGTTCTCAAAACTTGGCTCGAGGTTTTTGCAGAAAATAACATTAGCACTGAAATTCCTCGCTGTCATTCCAGATATATTCCAACATTGTCAGTGGAAGGAGCATCTATCAATGTTGCTGACCCCAAAACTCGTGAAAACTGCTTGAAAGGATACACTTTTGTGTTGGAATCTGTGCATTTGTATAAATTTGGGGATCAGCTAAAGTCTTTACTGGAAGTGGCTGGTGCTAAAACTATTTCTTTTGAAGAATTTCGTTCAAACAGCCAAGGTTCAGATTATGGAGACGATAATCGTGTGGTTTGTGTCATCCCAGGACCAGCATGCAAGTTTGATGTCTTTAATAAATTAAGTTCCTTGCTTAGGGTGAATGAGATGGATGTAATATCTGCTGCTTTTAGTGGACAGCTAGATCTATCTATTTTGAAATCACCATGTGTACTTGTTTCGTCATCATGCTCTACAGATGAGACAGTTGTAGCAGATTCAGATACCGAAGTTGAAACAGCTACATCAGCCCATGCAAGTGAGGCATACTGTGACGGTGATAATGTAAAATATTTAAAAACAGAAGAATTAGATGATGATTCTGGTGAATTGGATAAGAGAAAACATGAGAGAATGGAGGCATCCCTGGATGATGTCTCTACCAGATTGCATGAAACAAAAAGTGCAAAAGCAGAAACATCTTTGGATGTTTCTTCTGTCAGATCAGATACACATGCTACCAGTTTCAAGGATGGCAGTGGTGGTATCAAAGTAAGGAAAGACAAGGTCGATGATTATGAAAGTGGATATTCAGATATTGTTTACAGCCAAGATTTAGTTGTTCGAAATATGAACATAATTACCAACACAAGTACTGCACCAAACAGCAGCGTTCCAAATTTTAAGCGTTTTAGAAAGGGACAAACTCAATCTGGTAATAGTTTCGACAATCTTGTTCCATTTGCAAAATATCCATACAAGGATTCTAGCTCTGGGAATGATGAGATGGTCGAGTTTGTGAAGGAGGAGAAAAGGCGAAAGCAAACAGAAGCCGTGGCAGATGACCTATTTAATAATGAGAAGGCAAGAAGACGAGGCACAGCTGGTTCTCTTCGTGGCATTCTTATTTCATGA 1668 0.3891 MVWGLFPIDPLSGEDKYYIFKTGIYKVGRKGCDVIVTKDKGVSRVHAEIVVNTMNMLNPLPNERSHLSPSVQIRDCSKYGTFINKNVGPKKNVHELPNKEAALQDGDLVTFGTGNATYKFSYVPLNFFICSLNKVDQDLEEKISSIGASITHSLGEECTHVLVDQLMPLKKDLVDAVVAKKSCVLKTWLEVFAENNISTEIPRCHSRYIPTLSVEGASINVADPKTRENCLKGYTFVLESVHLYKFGDQLKSLLEVAGAKTISFEEFRSNSQGSDYGDDNRVVCVIPGPACKFDVFNKLSSLLRVNEMDVISAAFSGQLDLSILKSPCVLVSSSCSTDETVVADSDTEVETATSAHASEAYCDGDNVKYLKTEELDDDSGELDKRKHERMEASLDDVSTRLHETKSAKAETSLDVSSVRSDTHATSFKDGSGGIKVRKDKVDDYESGYSDIVYSQDLVVRNMNIITNTSTAPNSSVPNFKRFRKGQTQSGNSFDNLVPFAKYPYKDSSSGNDEMVEFVKEEKRRKQTEAVADDLFNNEKARRRGTAGSLRGILIS* 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g01101 555 Pfam FHA domain 25 112 IPR000253 GO:0005515
Rops9g01101 555 SMART FHA_2 24 88 IPR000253 GO:0005515
Rops9g01101 555 PANTHER NIBRIN-RELATED 393 541 IPR040227 GO:0006302|GO:0007095|GO:0030870
Rops9g01101 555 Gene3D - 3 123 - -
Rops9g01101 555 FunFam Nibrin 5 121 - -
Rops9g01101 555 CDD BRCT 125 190 - -
Rops9g01101 555 CDD FHA_NBN 3 122 - -
Rops9g01101 555 ProSiteProfiles Forkhead-associated (FHA) domain profile. 25 84 IPR000253 GO:0005515
Rops9g01101 555 SUPERFAMILY SMAD/FHA domain 16 127 IPR008984 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g01101 K10867 - gmx:100783205 846.654
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops9g01101 9 18108666 18116739 Rops9g01101 9 18108666 18116739 ECH