Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g01099 ATGGAACAACTGAAGCCAAGCCCTGCAAACTCTTCCCCTCTCACTCCACTTGGATTCTTGGACAGAGCAGCCACCGTTTACGGCGACACCCCTTCTGTTATTTACAATGACACCACTTACACTTGGTCCCAAACTCGCCGGCGATGTCTCCGGCTGGCCTCCGCCCTCTCCTCCCTTGGCATCCGCCGCGGCCACGTCGTATCCGTCGTCGCCCCCAACATCCCCGCCATGTACGAGCTCCACTTCGCCGTCCCATTCGCTGGCGCCGTCCTAAACAACATCAACACCCGCCTTGACGCACGCATCATGTCCGTTATCCTCCGTCACGCCGAGTCCAGGCTCATCTTCGTGGACTGCGCCTCACGCGATCTCGTTGTCGAAGCCTTATCATTATTATTCCCTTCTCAACGCCCAATCCTCGTCCTTATCGCCGACGATACTGTCGAGACTTCACCCTCATCCACCGTTGATTTTATTGACACGTATGAGGGTTTAATAAAGAAGGGTGATCCCGAGTTCAAGTGGATCCAGCCCAACAGCGAGTGGGACCCGATGTTAATTAATTACACTTCCGGAACGACGGCGTCTCCGAAAGGCGTTGTTCACTGCCACAGAGGCACCTTCATCATCACCCTTGACACGCTGGTTGATTGGGCGGTTCCGAAGCAACCGATTTACCTATGGACTCTCCCTATGTTCCACGCTAACGGGTGGAGCTTCCCGTGGGGGATCGCAGCCGTTGGAGGAACAAACATCTGTGTGAGAAAATTCGACGCGGGAATCGTCTACGGACTCATCAAACGACACGGCGTGACTCACATGTGCGGCGCGCCAGTGGTTCTCAACATGCTAACTAACTCCCCCAACAATAAACCGTTAGATAAAACCGTTCAGATCCTAACCGCCGGGGCGCCACCGCCGGCCGCCGTGCTTTTCCGGACGGAGTCGTTAGGTTTCGCGGTGAGCCACGGGTATGGACTAACGGAGACCGGTGGATTGGTGGTGACGTGCACGTGGAAGGAGAAATGGAACCGTCTGCCGGCGACGGAGAGGGCGCGGCTGAAGGCGCGACAGGGAGTGAGAACGATTGGGATGACGGAGGTGGACGTGGTGGGTCCCACGGGGGAGAGGGTTAAGCGTGACGGTTTAGCACTGGGGGAGGTTGTTATAAAAGGTGGGTGCCTCATGTTAGGGTATTTAAAGGACCCTGAAGGAACCGCAAATTGCTTCAAGAATGGGTGGTTTTACACTGGTGATGTGGGAGTGATGCATGAGGATGGGTACTTAGAGATTAAGGATAGGTCCAAGGATGTTATTATTAGTGGCGGTGAGAATTTGAGCAGCGTGGAGGTGGAATCGGTGCTTTATGGTCACCCAGCGGTGAATGAGGCGGCGGTGGTGGCAAGAGCCGATGAGTTCTGGGGAGAGACGCCGTGTGCGTTTGTGAATTTGAAGGAAGGGTTGAAGGAGAAACCGACGGAGAAGGAGATAGTGAAGTATTGTAGGGAGAATATGCCGCATTATATGGTTCCAAAGACGGTGGTTTTCAAGGAAGAGCTTCCAAAGACATCGACGGGGAAGATTCAGAAGTTTGTGCTTCGACAGATTGCAAAGGACATGGGACCACTCAAAAAGAGTCGAATGTGA 1647 0.5416 MEQLKPSPANSSPLTPLGFLDRAATVYGDTPSVIYNDTTYTWSQTRRRCLRLASALSSLGIRRGHVVSVVAPNIPAMYELHFAVPFAGAVLNNINTRLDARIMSVILRHAESRLIFVDCASRDLVVEALSLLFPSQRPILVLIADDTVETSPSSTVDFIDTYEGLIKKGDPEFKWIQPNSEWDPMLINYTSGTTASPKGVVHCHRGTFIITLDTLVDWAVPKQPIYLWTLPMFHANGWSFPWGIAAVGGTNICVRKFDAGIVYGLIKRHGVTHMCGAPVVLNMLTNSPNNKPLDKTVQILTAGAPPPAAVLFRTESLGFAVSHGYGLTETGGLVVTCTWKEKWNRLPATERARLKARQGVRTIGMTEVDVVGPTGERVKRDGLALGEVVIKGGCLMLGYLKDPEGTANCFKNGWFYTGDVGVMHEDGYLEIKDRSKDVIISGGENLSSVEVESVLYGHPAVNEAAVVARADEFWGETPCAFVNLKEGLKEKPTEKEIVKYCRENMPHYMVPKTVVFKEELPKTSTGKIQKFVLRQIAKDMGPLKKSRM* 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g01099 548 SUPERFAMILY Acetyl-CoA synthetase-like 11 539 - -
Rops9g01099 548 Gene3D - 3 436 IPR042099 -
Rops9g01099 548 FunFam 2,3-dihydroxybenzoate-AMP ligase 436 541 - -
Rops9g01099 548 Gene3D - 437 546 IPR045851 -
Rops9g01099 548 PANTHER ACYL-ACTIVATING ENZYME 1 543 - -
Rops9g01099 548 FunFam Long-chain-fatty-acid--CoA ligase FadD 1 436 - -
Rops9g01099 548 Pfam AMP-binding enzyme 21 441 IPR000873 -
Rops9g01099 548 CDD ttLC_FACS_AEE21_like 12 534 - -
Rops9g01099 548 Pfam AMP-binding enzyme C-terminal domain 450 527 IPR025110 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g01099 Rops-Chr9 18039706 18041711 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g01099 1 540 EF-hand Containing Proteins AT1G21540 62.862 0.0 732
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g01099 - - gmx:100779857 938.717
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops9g01099 9 18039706 18041711 Rops9g01099 9 18039706 18041711 ECH