Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g01067 ATGGCTTCTCCACCTGCTTTCAAGCGCACAGATTCTATAGCAGATAACATGCCGGATGCATTGAGACAGAGCCGGTACCATATGAAGAGGTGCTTTGCAAAGTACCTTGAAAAGGGTAGAAGGATCATGAAACTTCATCATTTGATGGAAGAAATGGAACGAGCTATAGATGACAAAAGTGAGAGAAATCAAGTATTGGAGGGCATTCTTGGCTTCATATTGAGCTCTACCCAGGAAGCTGTTGTTGATCCACCATATGTTGCCTTTGGAGTAAGGCCTAATCCAGGAGTTTGGGAATATATAAGTGTCAACTCTGAGGACCTCTCTGTTGAGGCTATCACTCCCACTGACTACCTCAAATTCAAGGAAAGAGTATATGACCAAAAATGGGCAATGGATGAAAACGCATTGGAAGCAGACTTTGGAGCATTTGATCTTGGGATTCCTCAATTAACCCTGTCTTCTTCTATTGGAAATGGACTCCAATTTGTTTCAAAGTTCTTGACTTCAAGGTTAACTGGGAAATTGGCTAAAACACAGGCTATAGTGTACTACTTATTAAAACTAAATCATCAAGGAGAAAGCCTCATGATAAATGATACCCTGAGCTCAGCTGCAAAGCTTCAGATGGCACTTGTAGTGGCTGATGTATTCCTCTCAGCACTTCCCAAAGACACTGCATATCATAATTTTGAGCTAAGGTTAAAGGAGTGGGGTTTTGAGAGAGGATGGGGAGATACTGCAGGAAGAGTGAAGGAGACAATGGGAACACTATCAGAAGTACTCCAAGCACCTGACCCTGTGAACTTGGAGAAATTTTTCAGCAGGATTCCCATAATATTCAAAGTAGTGATCTTCTCAATTCATGGTTATTTTGGGCAGGCAGATGTTCTTGGCTTGCCAGACACTGGTGGCCAGGTAGTTTACATATTGGACCAAGTCAAGGCTTTGGAAGCAGAGTTACTTCTAAGAATTAAGCAACAAGGGCTAAATGTGAAACCTCAAATTCTTGTGGTAACAAGACTCATTCCTGATGCTCGGGGAACCAAGTGCCACCAGGACTTTGAACCTATCAATGATACTAAACACTCCCACATTCTACGTGTGCCTTTTCAGACAGAGAAAGGAATCCTGCGTCAATGGGTTTCTCGCTTTGACATTTATCCCTATCTTGAGAGGTTTACTCAGGATGCAACAGCCAAGATTCTGGACCTAATGGAAGGCAAACCAGATCTTGTTATTGGAAATTACACTGATGGAAATTTGGTAGCATCTCTAATGGCTAGAAAACTTGGGATAACTCAGGGAACCATAGCACATGCTTTAGAGAAGACCAAGTATGAAGACTCAGATGTTAAGTGGAAAGAGTTGGACCCCAAGTATCATTTCTCATGTCAATTCATGGCTGATACAGTTGCAATGAATGCGTCTGATTTCATCATAACTAGCACATACCAGGAAATTGCTGGAAGCAAAGATAGACCTGGACAATATGAAAGCCATGCTGCGTTTACACTCCCGGGGCTCTGTAGGGTTGTTTCAGGGATAAATGTATTTGATCCTAAGTTCAACATAGCTGCACCTGGAGCTGACCAGTCTATCTACTTCCCTTACACAGAGAAAGGCAGAAGACTCACTCAATTTCAGCCTGTCATTGAAGACCTTCTCTTCAACAAAGTGGATAACATTGAGCATATTGGATATCTAGCAGACAGGAGGAAACCAATCATCTTCTCAATGGCAAGGCTTGATGTTGTGAAGAACATAACCGGCTTAGTTGAATGGTATGCAAAGAACAAGAGACTCAGAAACTTGGTGAATCTTGTCATAGTTGGGGGTTTCTTTGACCCTTCAAAATCAAAAGACAGGGAGGAAATGGAAGAAATAAGAAAGATGCATGATTTAATTGAAAAATACCAACTCAAGGGTCAATTCAGATGGATTGCAGCACAGACTAATAGGTATCGAAATGGAGAGCTCTACCGTTGCATTGCTGACACAAGGGGAGCATTTGTGCAGCCTGCTTTGTATGAAGCATTTGGATTAACTGTCATTGAAGCAATGAACTGTGGCTTACCCACTTTTGCTACCAACCAAGGAGGTCCGGCAGAAATTATTGTTGATGGGGTCACTGGCTTCCACATTGACCCCCTCAATGGAGATGAATCAAGCAACAAAATTGCTGATTTCTTTGAAAAATGCAAAGTAGACCCAACACACTGGAATGTGATTTCTGCAGCTGGATTGCAGCGCATAAATGAATGCTATACCTGGAAGATCTATGCAAACAAGTTGGTAAACATGGGAAACATGTATACCTTTTGGAGGCTAGTGAATAAGGAGCAAAAAGAGGCAAAGCAAAGATACATCCATATGTTCTATAATCTCATATTCAAGAATTTGGTGAAGACTGTACCTGTTCCAAGTGATGAACCTCAGCAACCACTGGGCAAGCAGCCAAGTAAACTGGGCTCTAGCAACAGACGTTCACAATCCTCATTGCGAAGGTTACTTGGAGCTTAA 2523 0.4205 MASPPAFKRTDSIADNMPDALRQSRYHMKRCFAKYLEKGRRIMKLHHLMEEMERAIDDKSERNQVLEGILGFILSSTQEAVVDPPYVAFGVRPNPGVWEYISVNSEDLSVEAITPTDYLKFKERVYDQKWAMDENALEADFGAFDLGIPQLTLSSSIGNGLQFVSKFLTSRLTGKLAKTQAIVYYLLKLNHQGESLMINDTLSSAAKLQMALVVADVFLSALPKDTAYHNFELRLKEWGFERGWGDTAGRVKETMGTLSEVLQAPDPVNLEKFFSRIPIIFKVVIFSIHGYFGQADVLGLPDTGGQVVYILDQVKALEAELLLRIKQQGLNVKPQILVVTRLIPDARGTKCHQDFEPINDTKHSHILRVPFQTEKGILRQWVSRFDIYPYLERFTQDATAKILDLMEGKPDLVIGNYTDGNLVASLMARKLGITQGTIAHALEKTKYEDSDVKWKELDPKYHFSCQFMADTVAMNASDFIITSTYQEIAGSKDRPGQYESHAAFTLPGLCRVVSGINVFDPKFNIAAPGADQSIYFPYTEKGRRLTQFQPVIEDLLFNKVDNIEHIGYLADRRKPIIFSMARLDVVKNITGLVEWYAKNKRLRNLVNLVIVGGFFDPSKSKDREEMEEIRKMHDLIEKYQLKGQFRWIAAQTNRYRNGELYRCIADTRGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGPAEIIVDGVTGFHIDPLNGDESSNKIADFFEKCKVDPTHWNVISAAGLQRINECYTWKIYANKLVNMGNMYTFWRLVNKEQKEAKQRYIHMFYNLIFKNLVKTVPVPSDEPQQPLGKQPSKLGSSNRRSQSSLRRLLGA* 841
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g01067 840 PANTHER - 7 810 IPR012820 GO:0005985|GO:0016157
Rops9g01067 840 MobiDBLite consensus disorder prediction 809 840 - -
Rops9g01067 840 Gene3D Glycogen Phosphorylase B; 284 801 - -
Rops9g01067 840 Pfam Sucrose synthase 9 557 IPR000368 GO:0005985|GO:0016157
Rops9g01067 840 Gene3D - 11 149 - -
Rops9g01067 840 NCBIfam sucrose synthase 26 806 IPR012820 GO:0005985|GO:0016157
Rops9g01067 840 FunFam Sucrose synthase 531 758 - -
Rops9g01067 840 Coils Coil 42 69 - -
Rops9g01067 840 Gene3D - 150 279 - -
Rops9g01067 840 FunFam Sucrose synthase 12 149 - -
Rops9g01067 840 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 300 767 - -
Rops9g01067 840 MobiDBLite consensus disorder prediction 814 834 - -
Rops9g01067 840 Gene3D Glycogen Phosphorylase B; 531 758 - -
Rops9g01067 840 FunFam Sucrose synthase 150 279 - -
Rops9g01067 840 Pfam Glycosyl transferases group 1 569 732 IPR001296 GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g01067 Rops-Chr9 17453793 17459326 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g01067 5 811 Glycosyltransferase AT4G02280 57.497 0.0 986
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g01067 K00695 - gmx:100808482 1526.53
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops9g01067 9 17453793 17459326 Rops9g01067 9 17453793 17459326 ECH