Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g01050 ATGGCAAAGGCACACATAATTGGAATAGCCATGGATTTCTCTCCTACAAGCAAATTAGCCCTTAGATGGGCTGTTGATAATTTGGTTAACCAAGGTGATCAAATCATCATCATCACTGTTCAACCTCCCAAAGCTGATCACACTAGAAAGAAGCTTTTTGAGGACACTGGTTCACCTTTGGTGCCTCTGGAGGAATTGAGGGAGATAAACTTTACAAAGCAATATGGGATTGCTAGGGATCCTGAATTCATAGATATCCTTGACACTCTCTCCAAGACCAAAGGGGCAAAGGTAGTGGCAAAGGTGTACTGGGGAGATCCAAGGGAGAAGTTGTGCAGTGCTGTGGAAGATCTTCATCTGGACTCTTTGGTTGTTGGAAGCAGGGGTTTAGGTCCAATTAAAAGGGTGTTGTTAGGCAGTGTAAGCAAGCATGTGGTGACAAATGCTTCTTGCCCCGTCACAGTGGTTAAGGGAAAATAA 480 0.4417 MAKAHIIGIAMDFSPTSKLALRWAVDNLVNQGDQIIIITVQPPKADHTRKKLFEDTGSPLVPLEELREINFTKQYGIARDPEFIDILDTLSKTKGAKVVAKVYWGDPREKLCSAVEDLHLDSLVVGSRGLGPIKRVLLGSVSKHVVTNASCPVTVVKGK* 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g01050 159 CDD USP_Like 7 156 - -
Rops9g01050 159 Gene3D HUPs 2 159 IPR014729 -
Rops9g01050 159 PRINTS Universal stress protein signature 117 129 IPR006015 -
Rops9g01050 159 PRINTS Universal stress protein signature 4 22 IPR006015 -
Rops9g01050 159 PRINTS Universal stress protein signature 135 157 IPR006015 -
Rops9g01050 159 FunFam Universal stress protein family protein 1 159 - -
Rops9g01050 159 PANTHER IMP2'P 1 158 - -
Rops9g01050 159 Pfam Universal stress protein family 5 157 IPR006016 -
Rops9g01050 159 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 7 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g01050 Rops-Chr9 17194208 17195576 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g01050 - - gmx:100500682 290.041
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops9g01050 9 17194208 17195576 Rops9g01050 9 17194208 17195576 ECH