Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g00923 ATGGAGGGTGTGGATCCTTCTCGAACTTTCCTGAAGGACGTTAAGCGCATCATCATCAAGGTTGGGACTGCTGTTGTCACACACCCAGAAGATGGAAGATTGGCCGTTGGAAGATTAGGGGCTCTCTGTGAACAGATTAAGGAACTGAATTCCCTAGGATACGAGATTATTTTGGTGTCATCTGGCGCTGTTGGTATTGGCCGCCAAAGGCTCAGATACAGGAAATTAATTAACAGCAGCTTTGCCGAGCTACAGAAGCCGCAGGTTGAACTTGATGGCAAGGCATGTGCTGCCGTTGGACAAAACAGTCTCATGGCTCTTTATGATACTTTGTTCAGTCAACTCGATGTGACATCTGCTCAACTTCTTGTGACCGACAATGATTTTAGAGATAAAGATTTTAGAAAGCAACTGACTGAAACTGTGAAATCATTGTTAGGGCTAAAAGTTATTCCAGTATTCAATGAGAATGATGCTGTCAGTACTAGGAAAGCTCCATATGAGGATTCTTCTGGTATATTTTGGGATAATGATAGTTTATCTGCTTTGTTGGCCTTGGAGTTAAAAGCCGATCTTCTTGTTTTGTTGAGTGATGTTGAAGGTCTTTATAGTGGCCCTCCAAGTGACCCGCATTCAAAGCTTATTCATACATATATCAAGGAAAAGCATCAGAATGAAATTACTTTTGGTGATAAGTCTAGGGTGGGAAGAGGTGGAATGACTGCCAAAGTAAAAGCTTCTGTTCATGCAGCTGAGGCTGGCATTCCTGTGATTATTACCAGTGGTTTTGCAGCTGAAAATATCATTAACATTCTCCAAGGACAACAGATTGGAACCCTCTTCCATAAAGATGCACGTGAGTGGGCCCCATTAAAGGAGGTTGATGCACGTGAGATGGCTGTTGCAGCCAGAGAATCTTCCAGACGGCTTCAGGCATTATCTTCAGAAGAGAGGAAACAAATTTTACTAAAAATAGCTGATGCCCTGGAAGCAAGTGAAAAAGTGATCAGGACTGAAAATGAAGCTGATATTGCTGCTGCACAACAAGAAGGATATGAAAAATCCTTGGTGGCTAGGCTGGCTTTAAAACCTGGGAAGATAGAAAGCCTTGCAAACAACTTGCGAATTATTGCAAACATGGAAGATCCAATTGGCCAAGTACTAAAAAAAACTGAGCTTTCGGATGGGCTAATTTTAGAGAAAACATCATCTCCTTTGGGAGTTCTCCTGATTGTTTTTGAGTCTCGCCCTGATGCACTAGTACAGATAGCTTCCCTGGCAATCCGAAGTGGGAATGGGCTTCTCTTGAAAGGAGGCAAGGAAGCTAAGCGATCAAATGCAATTTTGCACAAAGTAATTACTGAAGCTGTACCAGATACTGTTGGTGGAAAACTTATTGGACTTGTGACCTCAAGGGCAGAAATTCCTGAACTACTTAAGCTGGATGACGTAATTGATCTGGTGATTCCTAGAGGCAGCAATAAACTTGTTTCTCAGATCAAGAGTTCGACTAAAATTCCCGTTTTGGGTCATGCAGATGGAATTTGCCACATCTATGTTGATAAGTCTGCTAATATGGAGATGGCAAGGCGGATTGTACTGGATGCAAAAATAGATTATCCAGCAGGCTGCAATGCCATGGAAACGCTTCTTGTCCACAAGGATTTAATAGAGAAAGGTTGGCTCAATGATATTATTGTTGACCTACGAACCGAAGGTGTTACATTATATGGAGGACCAAGGGCTAGTTCTTTGTTAAATATTCCACAGGCACGGTCATTTCATCATGAGTACAGTTCGTTGGCTTGCACTATTGAAATTGTGGATGATGTGTATGCAGCTATTGATCATATAAATCTTCATGGAAGTGCACATACCGATTCCATCATCGCAGAAGATCACGAAGTAGCTGGTGTGTTCTTACGCCAAGTAGACAGTGCGGCTGTTTTTCACAATGCAAGTACCAGATTCTGTGATGGGGCGCGATTTGGGCTAGGCGCAGAGGTTGGAATAAGTACGAGTAGGATTCATGCTCGAGGTCCAGTAGGAGTTGAAGGATTGTTAACAACCAGATGGATTCTTAAAGGAAGTGGACAAGTTGTAGATGGTGATAAAGGGGTTGTCTACAGTCATAAAGATCTTGCAACTTAA 2151 0.424 MEGVDPSRTFLKDVKRIIIKVGTAVVTHPEDGRLAVGRLGALCEQIKELNSLGYEIILVSSGAVGIGRQRLRYRKLINSSFAELQKPQVELDGKACAAVGQNSLMALYDTLFSQLDVTSAQLLVTDNDFRDKDFRKQLTETVKSLLGLKVIPVFNENDAVSTRKAPYEDSSGIFWDNDSLSALLALELKADLLVLLSDVEGLYSGPPSDPHSKLIHTYIKEKHQNEITFGDKSRVGRGGMTAKVKASVHAAEAGIPVIITSGFAAENIINILQGQQIGTLFHKDAREWAPLKEVDAREMAVAARESSRRLQALSSEERKQILLKIADALEASEKVIRTENEADIAAAQQEGYEKSLVARLALKPGKIESLANNLRIIANMEDPIGQVLKKTELSDGLILEKTSSPLGVLLIVFESRPDALVQIASLAIRSGNGLLLKGGKEAKRSNAILHKVITEAVPDTVGGKLIGLVTSRAEIPELLKLDDVIDLVIPRGSNKLVSQIKSSTKIPVLGHADGICHIYVDKSANMEMARRIVLDAKIDYPAGCNAMETLLVHKDLIEKGWLNDIIVDLRTEGVTLYGGPRASSLLNIPQARSFHHEYSSLACTIEIVDDVYAAIDHINLHGSAHTDSIIAEDHEVAGVFLRQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILKGSGQVVDGDKGVVYSHKDLAT* 717
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g00923 716 PIRSF P5C_synthetase 1 716 IPR005766 GO:0003824|GO:0006561
Rops9g00923 716 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 304 699 IPR016162 GO:0016491
Rops9g00923 716 PANTHER GLUTAMATE SEMIALDEHYDE DEHYDROGENASE 4 715 - -
Rops9g00923 716 ProSitePatterns Glutamate 5-kinase signature. 233 250 IPR019797 GO:0004349|GO:0006561
Rops9g00923 716 CDD ALDH_F18-19_ProA-GPR 297 697 IPR000965 GO:0004350|GO:0006561
Rops9g00923 716 FunFam Delta-1-pyrroline-5-carboxylate synthase 4 288 - -
Rops9g00923 716 Pfam Aldehyde dehydrogenase family 292 559 IPR015590 GO:0016491
Rops9g00923 716 ProSitePatterns Gamma-glutamyl phosphate reductase signature. 608 630 IPR020593 GO:0004350|GO:0006561
Rops9g00923 716 Hamap Gamma-glutamyl phosphate reductase [proA]. 295 701 IPR000965 GO:0004350|GO:0006561
Rops9g00923 716 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 513 659 IPR016163 GO:0016620
Rops9g00923 716 SUPERFAMILY ALDH-like 295 700 IPR016161 GO:0016491
Rops9g00923 716 SUPERFAMILY Carbamate kinase-like 15 281 IPR036393 -
Rops9g00923 716 Gene3D - 5 289 IPR036393 -
Rops9g00923 716 FunFam Delta-1-pyrroline-5-carboxylate synthase 513 659 - -
Rops9g00923 716 NCBIfam glutamate-5-semialdehyde dehydrogenase 303 690 IPR000965 GO:0004350|GO:0006561
Rops9g00923 716 NCBIfam glutamate 5-kinase 15 287 IPR005715 GO:0005737|GO:0006561
Rops9g00923 716 Pfam Amino acid kinase family 15 261 IPR001048 -
Rops9g00923 716 Hamap Glutamate 5-kinase [proB]. 15 292 IPR005715 GO:0005737|GO:0006561
Rops9g00923 716 PRINTS Glutamate 5-kinase family signature 97 125 IPR001057 GO:0005524|GO:0016301
Rops9g00923 716 PRINTS Glutamate 5-kinase family signature 53 67 IPR001057 GO:0005524|GO:0016301
Rops9g00923 716 PRINTS Glutamate 5-kinase family signature 137 158 IPR001057 GO:0005524|GO:0016301
Rops9g00923 716 PRINTS Glutamate 5-kinase family signature 235 255 IPR001057 GO:0005524|GO:0016301
Rops9g00923 716 PRINTS Glutamate 5-kinase family signature 176 203 IPR001057 GO:0005524|GO:0016301
Rops9g00923 716 NCBIfam delta l-pyrroline-5-carboxylate synthetase 8 714 IPR005766 GO:0003824|GO:0006561
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g00923 Rops-Chr9 15010977 15019697 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g00923 K12657 - gmx:100809989 1264.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g03571 11 68135417 68142164 Rops9g00923 9 15010977 15019697 ECH
Rops9g00923 9 15010977 15019697 Rops9g00923 9 15010977 15019697 ECH
Rops11g03571 11 68135417 68142164 Rops9g00923 9 15010977 15019697 PCT