Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g00385 ATGGTAGAGGTTTTTCTAGGAACATCATCTCCTTTACTTTACTGTTCTTCTTATCCTCCTAGTTCTAGAAAATGCAGGGGAGTGTCAGGAAGAACATTGTTGAAGTGCTCATTGGAGCTCCCGAGTAAGGTTTTGACTAAGCATGTCTTATCTGGGCTTGCTGCTTCCTTGATATTTATTTCTCCAGCAAATCAGTCTGTAGCAGCTGATCTATCTCATCAACAAAATATATGCCAGCTTGCCAGTGCCGGTGATAATGCAGTTACTCTACCATTTGAGAATGGGTCTAATGAAAGAAGTGCAAATCTAATGATGATGAGAGGCATGACAGTCAAGGATTTGGACCCTGTCAGATATTCTGGAAGATGGTTTGAAGTTGCTTCACTCAAACGTGGATTTGCTGGACAAGGCCAAGAAGACTGTCATTGCACTCAGGGTGTATATACATTTGATAGGGAAGCACCGGCTATTCAAGTTGATACCTTTTGTGTTCATGGAGGCCCTAATGGATTTATAACTGGGATTAGGGGGAGGGTTCAATGTATTTCAGAAGAAGATTTGGAGAAAAATGAGACAGAGTTAGAGAAGCGGGAAATGATCAAAGAAAAATGCTATCTTCGCTTTCCGACATTGCCATTCATTCCCAAGGAACCTTATGATGTGATTGCTACTGATTATGACAATTTTGCCCTTGTTTCAGGAGCCAAGGACAAGAGTTTTATTCAGATATACTCAAGGACACCAAACCCTGGACCTGAATTTATAGAGAAATACAAAGCTTACCTGGCAAACTTTGGATATGATCCTAGCAAAATTAAAGATACACCTCAAGATTGCGAAGTAATGTCCAATAGTCAGCTAGCAGCTATGATGTCAATGTCAGGAATGCAGCAGGCATTAACAAACCAGTTCCCTGATCTAGGACTGAATTCCTCTATTGAACTTAATCCCTTTACAAGTGTATTTGACACTTTGAAGAAGCTTCTTGAGCTTTATTTCAAGTAG 1005 0.403 MVEVFLGTSSPLLYCSSYPPSSRKCRGVSGRTLLKCSLELPSKVLTKHVLSGLAASLIFISPANQSVAADLSHQQNICQLASAGDNAVTLPFENGSNERSANLMMMRGMTVKDLDPVRYSGRWFEVASLKRGFAGQGQEDCHCTQGVYTFDREAPAIQVDTFCVHGGPNGFITGIRGRVQCISEEDLEKNETELEKREMIKEKCYLRFPTLPFIPKEPYDVIATDYDNFALVSGAKDKSFIQIYSRTPNPGPEFIEKYKAYLANFGYDPSKIKDTPQDCEVMSNSQLAAMMSMSGMQQALTNQFPDLGLNSSIELNPFTSVFDTLKKLLELYFK* 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g00385 334 ProSitePatterns Lipocalin signature. 113 126 IPR022272 -
Rops9g00385 334 SUPERFAMILY Lipocalins 110 290 IPR012674 -
Rops9g00385 334 Gene3D - 109 291 IPR012674 -
Rops9g00385 334 PANTHER LIPOCALIN 103 280 IPR002345 GO:0036094
Rops9g00385 334 Pfam Lipocalin-like domain 115 277 IPR000566 -
Rops9g00385 334 Coils Coil 182 202 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g00385 - - gmx:100814557 568.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops9g00385 9 5201644 5204666 Rops9g00385 9 5201644 5204666 ECH