Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g00363 ATGGAACTCAAATTCATTCTGATTCTAACGTTTGTTTCTGTAACTGTCACTGCAGATTATGTTCGCCCTTTGCCTCGAAAAACTTTACACATCCCATGGGATCCAATTTCGAAGGCCCACTCTTCTTACCCACAACAGGTGCACATTTCTTTGGCAGGAGACAAGCACATGAGAATTACCTGGATAACTGATGATAAACATGCACCTTCATTTGTAGAATATGGAACACTACCTGTGAGATATGACTCAATAGCTGAAGGAGAGTGCACCTCTTATAATTATCTGTTATATAGCTCAGGAAAGATACACCATACTGTAATTGGGCCTTTGGAAGACAATACTGTGTACTTTTACAGATGTGGTGGACAAGGTCCTGAGTTCCAGCTCAAAACTCCTCCAGCTCAATTTCCAATTACTTTTGCTGTGGCTGGGGATCTGGGTCAAACTGGTTGGACTAAATCAACATTAGATCACATTGACCAATGTAAATATGATGTTTACATGCTTCCAGGAGACCTTTCATATGCTGATACTATGCAACATAGATGGGACACATTTGGTAAGTTAGTGGAGCCACTTGCTAGTACAAGGCCATGGATGGTAACAGAAGGAAATCATGAAGAGGAGAACATACTATTGTTAATGGATGGGTTTGTATCCTATAATTCCAGATGGAAAATGCCATTTAAGGAAAGTGGATCAACTTCAAATCTCTATTATTCTTTTGAAGTTGCAGGTGTTCATGTTATCATGCTTGGCTCTTATGCAAATTATGATGTGTACTCAGAACAATTCAGATGGCTAAAGGAAGATCTATCAAAAGTGGACAGGAAAAGGACACCTTGGCTGCTTGTGTTATTTCATGTGCCATGGTATAATAGTAACAAGGCTCATCAAGGTGCAGGGGATGATATGATGGCAGCCATGGAGCCATTGCTTTACGCTGCTGGTGTTGATTTAGTTATTGCTGGTCATGTCCATGCTTATGAACGTTCGAAACGTGTGTATGATGGAAGGTTGGATCCCTGTGGTGCTGTGCATATAACTATTGGTGATGGAGGAAACAGAGAAGGCTTAGCTCATAAGTATATAAATCCACAGCCAAAGTGGTCAGAATTTCGTGAAGCTAGTTTTGGTCATGGTGAGCTGAAGATTGTAAACTCCACCCACGCCTTCTGGAGTTGGCACAGGAATGATGATGATGAGTCAATAAAAGCTGATGATATCTGGATAACCTCTCTGGTCAGTTCAGGATGTGTTGATCTAAAGAGACATGAACTCAGGACTATGCTCATGACACCCTAA 1305 0.4107 MELKFILILTFVSVTVTADYVRPLPRKTLHIPWDPISKAHSSYPQQVHISLAGDKHMRITWITDDKHAPSFVEYGTLPVRYDSIAEGECTSYNYLLYSSGKIHHTVIGPLEDNTVYFYRCGGQGPEFQLKTPPAQFPITFAVAGDLGQTGWTKSTLDHIDQCKYDVYMLPGDLSYADTMQHRWDTFGKLVEPLASTRPWMVTEGNHEEENILLLMDGFVSYNSRWKMPFKESGSTSNLYYSFEVAGVHVIMLGSYANYDVYSEQFRWLKEDLSKVDRKRTPWLLVLFHVPWYNSNKAHQGAGDDMMAAMEPLLYAAGVDLVIAGHVHAYERSKRVYDGRLDPCGAVHITIGDGGNREGLAHKYINPQPKWSEFREASFGHGELKIVNSTHAFWSWHRNDDDESIKADDIWITSLVSSGCVDLKRHELRTMLMTP* 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g00363 434 Gene3D - 135 419 IPR029052 -
Rops9g00363 434 Pfam Purple acid Phosphatase, N-terminal domain 44 124 IPR015914 GO:0003993|GO:0046872
Rops9g00363 434 Gene3D - 43 134 - -
Rops9g00363 434 SUPERFAMILY Purple acid phosphatase, N-terminal domain 39 133 IPR008963 GO:0003993|GO:0046872
Rops9g00363 434 CDD MPP_PAPs 135 413 IPR041792 -
Rops9g00363 434 SUPERFAMILY Metallo-dependent phosphatases 137 402 IPR029052 -
Rops9g00363 434 Pfam Iron/zinc purple acid phosphatase-like protein C 345 402 IPR025733 -
Rops9g00363 434 PANTHER ACID PHOSPHATASE RELATED 7 412 IPR039331 GO:0003993
Rops9g00363 434 Pfam Calcineurin-like phosphoesterase 139 329 IPR004843 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g00363 Rops-Chr9 4641494 4644721 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g00363 44 419 Miscellaneous Gene Families AT1G13900 26.949 5.46e-28 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g00363 K22390 - gmx:100787977 836.639
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops9g00363 9 4641494 4644721 Rops9g00363 9 4641494 4644721 ECH