Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g00331 ATGGGTCAGATCGTGAGGAGGAAGAAGAAGGGACGACCCTCTAAGGCAGATCTAGCTCGCCGTTCCGGCCAATCTCCGACGACATCACAACCCGACCTCCGACGAAGCCGGCGGCGGCGAAATGTGAGGTACAACATAGATTATGACGATTACCTCGACGAGGAAGATGAGGATGAAGATGAAGACGAGAGAAGACGCGAGAAGAAGAAGTTGAAGCTTGTTGAAAAGCTGAACCAGGGTGCGGAAGAGGAAGAAGATGAAGACGAAGAGGAATCGGCACCCACTCGCGGTCGTGAGCGTGGGGAACACGCGCCGGAGGAAGAGAAAAAACCAGTGAGGAATAACGAAGATGGGGAGGAAGAAGAAGAAGAGGAAGAGGGTGAAGATGATGAAGAAGAAGAAGGGAATGAGGATGTTGAAGAACATGAAGAAGAAGGTGAAGGGGTTGAGGTAAAGGGCAGAAAGGTTGATTCCAAAGGGCTCCACTCTGTTTCAGGAACTCCATCGAAGCTTCCTTCATCTGGGATTCCATTGCCTGATAAGAGGACCCTGGAATTGATCCTTGACAAACTTCAGAAGAAGGACACTTATGGTGTTTATGCTGAGCCAGTTGATCCGGAAGAGCTTCCTGATTATCACGATGTGATTGACCATCCGATGGACTTTGCCACAGTGAGGAAGAAGTTGGCAAATGGATCTTATCCTACCTTGGAACAATTTGAGAGTGATGTGTTTTTGATTTGCTCAAATGCAATGCAATACAATGCGGCAGAGACTATATACCACAAACAGGCACGATCGATACAAGAACTAGCAAGGAAAAAGTTTGAGAAGTTAAGGATTGACTATGAACGCTCTCAGGGTGAGCTGAAATCTGATCAAAAATCAAGATCTAATTCCTTGGTTAAGAAGCTAGCAAAGAAGCCACTGGGTCATGCTTCACAGGAACCTGTTGGCTCTGATTTCTCTTCAGGTGCAACTCTTGCTACTATCGGAGATGTACTGCCAATTTCCCATCCAATGCAAGGTGCCATCAGTGAAAGGCCTGGCAACATTGATGGCCTTGTGGAGGGGAATGCTTTCTTCATCGATGCTAATCAAGAGAAAGCAGAAGACTTTTTATCAGGGAGGGGTCTGCTCTCCAAGTTGGGAAGGAAATCATCTGTGCAAGATTATGAACGTCGTGCTACTTATAATATGTCTAATCTCCCAGTTACTAGATCTGATTCAATATTTACGACATTTGAGACTGAAATTAAGCAGCTAGTTACTGTTGGACTTCAAGCTGAATATTCGTATGCCAGGAGTTTGGCTCGTTTTGCTGCAACTCTAGGACCTACTGCTTGGAGAATTGCTTCCCAAAGGATTCAGCAGGCGCTACCATCTGGCTGTAAATTTGGTTGTGGTTGGGTTGGGGAATATGAACCGCTTCCAACCCCAGTATTAATGCTTGATAATCGTGTCCAGAAACAAGCTAGTTTGGTAACAAAGTTGCAGTCTACTCCTGAATCAATAAAGGTTGACAAAAATTGTAAGAATGTAGAATCCACCATGGAACATCCTGGTAATGGACCAATGTTTGAAGGAAAACAGCTGTCAGTTCGCCCTGGTAGTGGACTCCCATCAGAAGGAAAACCATCTTTCTTTGGTTCTGCCGGAGTAAGACCGAATACATCTGTCAATCTCCTTTATCAGCAACCCAATGTCCAAACCAGGAATGCTGGCAAGTCTGAGAATAAGGGTTTGAAACAAGTGGAGTTAAACTCTTTACCCTCCAATGATCAGAATAATGCCAGTCTAGTTGCAAAGCTTACAAGTAATGCTCCAGCAACTGTGTCTAAGCCCAGAGAGATGGTACCTAGTAACATGAATATTTTACCATCAATACCTTTCAAGCAGCCAGATACTAATGGAGTTGTTAGTGGAGAGTTGCCTAATGGAAAAGTCAGGAATACTAATTTAAATAGAAGGATGACTGGCCCATCATCTGAAAGTACATCAAGTCAAACAGGCAGAGGAGCTCCCTTTGTTTCCCATGGGCAAGAGCAAAGTCTTAGTGACCCAGTTCAGCTGATGAGGATGTTAGCTGAAAAGGCTCAAAAACAACAAACTTCTAGTTCATCTAATCATTCCCCTGCTGATACTCCGCCAGTAACACCATCAGTTCCATCTGGACGGAGAGAAGACCCGAGCAATGCTTCAGCTGCAGCTGCCCGTGCATGGATGTCTGTAGGGGCGTCCGGGTTTAAACAAGGACCTGACAATGCTAGTTCACCCAAAAATCAGATTTCTGCAGATTCATTGTACAACCCAGCTCGAGATTTCCATCAGCATATTTCACGAATTAGGGGGGAGTTTCCTTCTGGTGGAATGTCTTTCCAGGGTGAGAAAAACAATTTTCCATTTCAGGCATTTGTACCCCAACCTATTCACCCAGTTGGCGTTTCACAGTTTCCAAACAGACCTATGGTTTTCCCTCAAGTAACAGCAGCTTCTGACCTATCCAGATTTCAAATGCAGCAGTCACCTTGGCGAGGTATCCGACCACCTAGTCAACCAAGACAGAAACAAGAAACACTCCCTCCTGACTTGAACATTGGTTTCCAATCACCTGGCTCCCCTGCAAAACAATCTTCTGGTGTGATGGTTGACTCACAGCAACCAGACCTTGCTTTGCAACTATGA 2685 0.4525 MGQIVRRKKKGRPSKADLARRSGQSPTTSQPDLRRSRRRRNVRYNIDYDDYLDEEDEDEDEDERRREKKKLKLVEKLNQGAEEEEDEDEEESAPTRGRERGEHAPEEEKKPVRNNEDGEEEEEEEEGEDDEEEEGNEDVEEHEEEGEGVEVKGRKVDSKGLHSVSGTPSKLPSSGIPLPDKRTLELILDKLQKKDTYGVYAEPVDPEELPDYHDVIDHPMDFATVRKKLANGSYPTLEQFESDVFLICSNAMQYNAAETIYHKQARSIQELARKKFEKLRIDYERSQGELKSDQKSRSNSLVKKLAKKPLGHASQEPVGSDFSSGATLATIGDVLPISHPMQGAISERPGNIDGLVEGNAFFIDANQEKAEDFLSGRGLLSKLGRKSSVQDYERRATYNMSNLPVTRSDSIFTTFETEIKQLVTVGLQAEYSYARSLARFAATLGPTAWRIASQRIQQALPSGCKFGCGWVGEYEPLPTPVLMLDNRVQKQASLVTKLQSTPESIKVDKNCKNVESTMEHPGNGPMFEGKQLSVRPGSGLPSEGKPSFFGSAGVRPNTSVNLLYQQPNVQTRNAGKSENKGLKQVELNSLPSNDQNNASLVAKLTSNAPATVSKPREMVPSNMNILPSIPFKQPDTNGVVSGELPNGKVRNTNLNRRMTGPSSESTSSQTGRGAPFVSHGQEQSLSDPVQLMRMLAEKAQKQQTSSSSNHSPADTPPVTPSVPSGRREDPSNASAAAARAWMSVGASGFKQGPDNASSPKNQISADSLYNPARDFHQHISRIRGEFPSGGMSFQGEKNNFPFQAFVPQPIHPVGVSQFPNRPMVFPQVTAASDLSRFQMQQSPWRGIRPPSQPRQKQETLPPDLNIGFQSPGSPAKQSSGVMVDSQQPDLALQL* 895
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g00331 894 Coils Coil 64 91 - -
Rops9g00331 894 MobiDBLite consensus disorder prediction 1 15 - -
Rops9g00331 894 MobiDBLite consensus disorder prediction 117 145 - -
Rops9g00331 894 SMART bromo_6 173 281 IPR001487 GO:0005515
Rops9g00331 894 MobiDBLite consensus disorder prediction 62 79 - -
Rops9g00331 894 PRINTS Bromodomain signature 209 225 IPR001487 GO:0005515
Rops9g00331 894 PRINTS Bromodomain signature 225 243 IPR001487 GO:0005515
Rops9g00331 894 PRINTS Bromodomain signature 243 262 IPR001487 GO:0005515
Rops9g00331 894 ProSiteProfiles Bromodomain profile. 192 262 IPR001487 GO:0005515
Rops9g00331 894 MobiDBLite consensus disorder prediction 93 116 - -
Rops9g00331 894 MobiDBLite consensus disorder prediction 697 715 - -
Rops9g00331 894 MobiDBLite consensus disorder prediction 750 766 - -
Rops9g00331 894 MobiDBLite consensus disorder prediction 1 179 - -
Rops9g00331 894 MobiDBLite consensus disorder prediction 646 684 - -
Rops9g00331 894 MobiDBLite consensus disorder prediction 629 684 - -
Rops9g00331 894 ProSitePatterns Bromodomain signature. 198 254 IPR018359 -
Rops9g00331 894 CDD Bromodomain 180 276 - -
Rops9g00331 894 MobiDBLite consensus disorder prediction 840 894 - -
Rops9g00331 894 MobiDBLite consensus disorder prediction 697 766 - -
Rops9g00331 894 Pfam Bromodomain 186 266 IPR001487 GO:0005515
Rops9g00331 894 PANTHER BROMODOMAIN CONTAINING PROTEIN 6 893 - -
Rops9g00331 894 Gene3D - 179 301 IPR036427 GO:0005515
Rops9g00331 894 SUPERFAMILY Bromodomain 174 279 IPR036427 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g00331 Rops-Chr9 4119181 4125354 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g00331 K22184 - gmx:100792844 1049.27
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops9g00331 9 4119181 4125354 Rops9g00331 9 4119181 4125354 ECH