Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g00327 ATGGAGGAGCACACTTTTGTATCGAAAGCGAGGACCGCCTTTCATTCCGCAGCTGCAAAAGCGGAGAGAGTGCTATTGGACTTCAAATCCGATCGAGAAGATCACGATAAGCAATCGCCCAACAGCTTGACGAGGCAACCGGAAGTTGAATCTCCTCAAAAGGATAACGAGTCGAAGCTTCGCAGTGAATTGAAGAATTTAAAGTGGAGGCCTCCACATTTAGGAATAAAGCAAGATTGGCAAGATAGAATTAAGAACATTCGGATAGGGAGAAAGGAAGTTGAAGATACAGATAAAGCTGGGGATGCAAACATGGCAGTTCCATTTTATGATGAAAATTTGTACCTCCTGAATGTGAAGAATGATCTTGAGGCTAAGGCTTTAGAAGCAATTCCCTCAGTTGAAGGCCTGACTGCTGCAACTAAAGATGCCATTCCTCCATCATCTGTGCTGAAGCAATTGGCCATAGCTGTTGAGGCTGGAAGTAAAACAAAGTCAATGAAAGATCTTATAGCTTCATCAGGAGGTTCTTCACCTGCCAAAGAGAGGGCAGGCTTAAGTCTCTCTGCAGTTAAGGCTTTAGTGTTGCGTGAAAAGGAGGACAAACTTACCTCTGAGTTTAGTAGCAATGACAAAGTCGTACATTTGATTAATTCTCTGTTTGATCCAGAGGGAGATTTTCTTAGAAGGAAGATCAACTCCAATCCAGAGGAAACTGCCATAACATCTTTGCCAAGAGATATTCATGGTGCTCCTCCTGAAAGCCTTGTTGTTAAGATAGCTGAAATCATTGGAAACTTCAAGACCGTTCGAAAAATGGCTTTGTTCTGGTGCAGGGTTGTTGCTGAACTGAGAAGACTTTGGTCTGAAGAACAACATATACCTGGAGTCCCCCAGAATGAGATTCCAGATCTGAACTCATGTCTTCTGTATCAACAATTTCAAGTAATTAATTGTTGTATCTCTCGGAAAAGGTTCCGTATCATTGCCACCGAATCTCTAGACTCTATGATGATGCAAGCTAGTTCAAACATAGAAGGATCAGTCAATGATAGAGTTGGAGCTCCTGCAAGCCCTGTTCTATATGCTAGATTAAATACTGGGGAGCTTGTTCTTCGACTTGGTGCTAATTGCCCTGCTGGGGATCTGACATTGTTAGAAACTGGCGAGCCTGTGTACTCTCCTGTCACCCAGGAAGGACCTTTGCTTACAGAAGATCTCATCAGGGAAACAGAGGAGTTTGTGCTACGGACAGGGAGTGTTGGTGCTGGGTGCTCTCAACTGCTCTCAGATATGCAGGCTTTCAAGGCTGCAAATCCTGGATGTATTTTGGAGGATTTTGTAAGATGGCACTCACCTCCTGATTGGACAGAAAATGAGGCAAGTCTCGAGGACACTGATGTTTTTGATGGTGGTGAGCCATTGTCTACCAGAGGTCAGCTAAGTCGGCGAATGCAAAAAGAAGGTAATTTATGGCGTGAATTGTGGGAAACATCTAAACCAGTACCGGCAGTTAAACAGGCACCTCTCTTCGATGAGGACTTGGCAGTGGAAGGCATCCTCAATGCCTTTGAGGGCATCCATGCTTCTGAGCTTTTTGGACAGCTGTTTGTTTCTTTACTTGGTTTAGGATTTGCAATTGCCGAACCTATGCTGTCTAGTAACAGTGACTTCTCAAAGTTGTTCTATGACTGCAAGGAGTACATAGTTGCCACATGTCAAAGCGACAACAAATTGAGTGAGAAAGTTGATGACCTTGTCCAGGTATATGAAACAGTGGAGACAATGTTACTGAATCCTGAAGAAGCACTAAAGATGATGAAGCAGACAGAAGAATCACCTACGATTACTGATGAACCAAAGAGCCGGTTTAAGAGGCTTAGCCTTATCTTTGGTGGCAAAGATAAACTATTGAGAAAGCCCGTCTCAAAAGATCAGATAACCGATGAAGAAAAGCCAACACGGCACTCTTTCTCGGGTTTCTTTGACAGCAAATCATCTTTATTTTCAAAGAAGCCTCCTAAGTCTGGATGCCCATCTCCTTCTTCTGCGAAACCTTCTCTCGAAACTGAATGGACAGTTGTTTAG 2088 0.4353 MEEHTFVSKARTAFHSAAAKAERVLLDFKSDREDHDKQSPNSLTRQPEVESPQKDNESKLRSELKNLKWRPPHLGIKQDWQDRIKNIRIGRKEVEDTDKAGDANMAVPFYDENLYLLNVKNDLEAKALEAIPSVEGLTAATKDAIPPSSVLKQLAIAVEAGSKTKSMKDLIASSGGSSPAKERAGLSLSAVKALVLREKEDKLTSEFSSNDKVVHLINSLFDPEGDFLRRKINSNPEETAITSLPRDIHGAPPESLVVKIAEIIGNFKTVRKMALFWCRVVAELRRLWSEEQHIPGVPQNEIPDLNSCLLYQQFQVINCCISRKRFRIIATESLDSMMMQASSNIEGSVNDRVGAPASPVLYARLNTGELVLRLGANCPAGDLTLLETGEPVYSPVTQEGPLLTEDLIRETEEFVLRTGSVGAGCSQLLSDMQAFKAANPGCILEDFVRWHSPPDWTENEASLEDTDVFDGGEPLSTRGQLSRRMQKEGNLWRELWETSKPVPAVKQAPLFDEDLAVEGILNAFEGIHASELFGQLFVSLLGLGFAIAEPMLSSNSDFSKLFYDCKEYIVATCQSDNKLSEKVDDLVQVYETVETMLLNPEEALKMMKQTEESPTITDEPKSRFKRLSLIFGGKDKLLRKPVSKDQITDEEKPTRHSFSGFFDSKSSLFSKKPPKSGCPSPSSAKPSLETEWTVV* 696
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g00327 695 MobiDBLite consensus disorder prediction 642 658 - -
Rops9g00327 695 MobiDBLite consensus disorder prediction 642 695 - -
Rops9g00327 695 MobiDBLite consensus disorder prediction 27 41 - -
Rops9g00327 695 PANTHER RAB3 GTPASE-ACTIVATING PROTEIN CATALYTIC SUBUNIT 108 679 IPR045700 GO:0005096|GO:0043547
Rops9g00327 695 MobiDBLite consensus disorder prediction 659 695 - -
Rops9g00327 695 MobiDBLite consensus disorder prediction 27 60 - -
Rops9g00327 695 Pfam Rab3 GTPase-activating protein catalytic subunit 373 525 IPR026147 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g00327 Rops-Chr9 4064015 4073994 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g00327 K18270 - gmx:100818643 1127.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops9g00327 9 4064015 4073994 Rops9g00327 9 4064015 4073994 ECH
Rops11g02756 11 47548202 47562131 Rops9g00327 9 4064015 4073994 PCT