Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g00313 ATGAAGAGCCAGAAAAGCATGCCGTTCTCTACCTTACCATTATTATCCCTTTTGATATTGGCCTTTCTCTCCCTTGCCATCGCTCAATCCTGTAGTCATGGGTTTGCTGAACTTATCAAAAAAAGAAACATCTCAGAGTGCAAGACATTACGAACTCTTGGGGCTGAGTTTGGTTGGAACTATCACAATGGCACTAACTCCACCACTCTTGAAATCTTGTTTGGTGCCAAACTCGATGCCCCAGAAGGGTGGATAGCATGGGGGGTGAATCCAGGAAGAAGGGCAGAGATGATTGGAACCAAAGCTCTCATAGGCATTAAACACCAACAAATATTGAAAGTGAATACATACGATGTTACCAAGGAGATTGTAAGTGGATGCCGTTTGCTACCATCAAAAATTGAACTGCAAGTGTCCAATATGTCAATGACGAGTGAAGATTCTACTAAGCCTGACTTTTACACTATATATGCTAGACTGGTCCTCCCTTCTGATGAGTATAACATTACAAGGCTGAATCATGTGTGGCAAGTTGGGTATGCAGTTACAGAAGAACAACCTTTGTACCATCCAAGAACTCTTCACAATGTTGACAGCACAGAGACCATAGACTTGACTTCTAACGGTGGTCGCAGCACTGGACAGTATCGGAGTTACCTTAGATCGGTACATGGAGTTCTAAACATTATCGGGTGGGGAACACTGTTACCAATTGGAGTTATAATCGCGAGGTACTTTAGAGTGTTTCCTTTTCATTGGGATCCATTTTGGTTTTACCTTCATATTGGTTGCCAGTTAACTGGGTTTCTCGTTGGCACCGCTGGCTTTGTTATTGGACTAAGCCTTGGACAGGCTTCAAGATACTACACCTTCCACACTCATCGAATCTTTGGCATTATCATATTCACGTTTAGCACAGTCCAGATGTTGGCCTTTCGCTTAAAGCCCAAGCTAACAGATGATTACCGCAAATATTGGAACATGTACCATCATTTTCTTGGGTATGGGTTGCTGGCTATCATATTCATGAACATATTCAAAGGAATTTCCATTTTGAAAGGTGGAGAGGGATGGAAGTGGGGTTTCGTTGGAATTCTTGGATTTTTGGGTGCCATCGCATTTGGTTTGGAGATTTTCACTTGGATTCGCTTCTTCATGCTGAAATCGAAGCAGAACCAGCCAGATAAAGATAAAGAGAAAAAATAA 1206 0.4221 MKSQKSMPFSTLPLLSLLILAFLSLAIAQSCSHGFAELIKKRNISECKTLRTLGAEFGWNYHNGTNSTTLEILFGAKLDAPEGWIAWGVNPGRRAEMIGTKALIGIKHQQILKVNTYDVTKEIVSGCRLLPSKIELQVSNMSMTSEDSTKPDFYTIYARLVLPSDEYNITRLNHVWQVGYAVTEEQPLYHPRTLHNVDSTETIDLTSNGGRSTGQYRSYLRSVHGVLNIIGWGTLLPIGVIIARYFRVFPFHWDPFWFYLHIGCQLTGFLVGTAGFVIGLSLGQASRYYTFHTHRIFGIIIFTFSTVQMLAFRLKPKLTDDYRKYWNMYHHFLGYGLLAIIFMNIFKGISILKGGEGWKWGFVGILGFLGAIAFGLEIFTWIRFFMLKSKQNQPDKDKEKK* 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g00313 401 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 31 - -
Rops9g00313 401 ProSiteProfiles Cytochrome b561 domain profile. 188 385 IPR006593 -
Rops9g00313 401 Pfam Protein of unknown function (DUF568) 97 205 IPR045265 -
Rops9g00313 401 Gene3D - 202 388 - -
Rops9g00313 401 ProSiteProfiles DOMON domain profile. 53 179 IPR005018 -
Rops9g00313 401 PANTHER CYTOCHROME B561 AND DOMON DOMAIN-CONTAINING PROTEIN 15 394 - -
Rops9g00313 401 CDD Cyt_b561_FRRS1_like 198 378 - -
Rops9g00313 401 PIRSF UCP037471 5 401 IPR017214 -
Rops9g00313 401 SMART 561_7 223 349 IPR006593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g00313 Rops-Chr9 3957813 3960820 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g00313 - - gmx:100791697 549.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops9g00313 9 3957813 3960820 Rops9g00313 9 3957813 3960820 ECH