Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g00294 ATGGATCATAGCTGTAGTTCACCAAGAACGCCAAATGTTCGGCATAGAAGACGCTCAAATGAGTTTCCTCTAGAGATAAGCAAATCAAATGGAAACCATTTACTTGTCAATGATAAATATAAATACAGATCAATGTGGATCCGAGCATGCTCATCTCTGTGGATGGTAGCTTCTGTCTCACTTATCATTTACTTGGGTCATCTTTACATCTGGGCCATGGTTGTTGTTATCCAAATATTTATGGCCAGTGAACTCTTCAATCTATTGAGAAGAGCTAATCAAGATAAATGTCTCCCTAGGTTTAAGCTCTTGAACTGGCATTTTTTCTTCACAGCAATGCTATACGTGTATGGCCGTATTCTCAAACAACAACTTGTGAATACAGTGACCTCAGATAAAATCTTCTATAAACTTGTGACCAACCTGATCAAGTATCAGATGGTTATATGTTACTTCTTATATATCGCAGGTTTTGTATGGTTTATTCTTTCATTAAAGAAGAGATATTACAAGTATCAATTTGGCCAGTATGCATGGACACATATGATACTTATTGTTGTGTTTACCCAGTCTGCATTCACTGTAGCCAATATATTTGAAGGGATATTCTGGTTTCTTTTCCCTGCATCCCTTATTGCTATGAATGATGTTGCTGCATATTTCTTCGGTTTCTTTTTTGGGAGAACACCTCTGATCAAGCTATCTCCAAAAAAAACATGGGAAGGTTTTATTGGAGCATCTGTTGCCACTATGATTGCCGCATTTACGTTTGCAAACTTCTTGGGTCGCTTCCAGTGGCTAACATGTCAAAGGAAGGATTTATCAACTGGTTGGCTTCAGTGTGTCCCTGATCCAATTTTTAAGCCAGAGTACATTCCATTGCCAGGATTCATTTCTCATTGGTTTTCTTGGAAAGAGATAGCAGTTTTGCCAGTACAGTGGCATGCCTTGTGGCTGGGACTATTTGCTTCCATCATAGCACCGTTTGGAGGATTTTTTGCTAGTGGTTTCAAAAGAGCTTTTAAAATCAAGGACTTTGGTGATAGTATACCTGGACATGGTGGATTTACTGACAGAATGGACTGCCAGATGGTAATGGCTGTTTTTGTATACATTTATTATCATTCATTTGTTATCCCCCAAGACAATTCCGTTGAGAGGTTTTTGGACCAGATAACAAGGAACCTTGGTTTTGAGGAGCAGCTAGCTCTTTACACAAAACTCGGGCAGATATTACAAGAAAGGCGTTTTATCCAGACATGA 1263 0.388 MDHSCSSPRTPNVRHRRRSNEFPLEISKSNGNHLLVNDKYKYRSMWIRACSSLWMVASVSLIIYLGHLYIWAMVVVIQIFMASELFNLLRRANQDKCLPRFKLLNWHFFFTAMLYVYGRILKQQLVNTVTSDKIFYKLVTNLIKYQMVICYFLYIAGFVWFILSLKKRYYKYQFGQYAWTHMILIVVFTQSAFTVANIFEGIFWFLFPASLIAMNDVAAYFFGFFFGRTPLIKLSPKKTWEGFIGASVATMIAAFTFANFLGRFQWLTCQRKDLSTGWLQCVPDPIFKPEYIPLPGFISHWFSWKEIAVLPVQWHALWLGLFASIIAPFGGFFASGFKRAFKIKDFGDSIPGHGGFTDRMDCQMVMAVFVYIYYHSFVIPQDNSVERFLDQITRNLGFEEQLALYTKLGQILQERRFIQT* 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g00294 420 PIRSF CDP-DAG_synth_e 3 420 IPR016720 GO:0004605
Rops9g00294 420 ProSitePatterns Phosphatidate cytidylyltransferase signature. 335 361 IPR000374 GO:0016020|GO:0016772
Rops9g00294 420 PANTHER PHOSPHATIDATE CYTIDYLYLTRANSFERASE 15 417 IPR016720 GO:0004605
Rops9g00294 420 Pfam Cytidylyltransferase family 46 377 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g00294 Rops-Chr9 3667076 3672910 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g00294 2 415 Lipid Metabolism Gene Families AT4G26770 74.580 0.0 641
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g00294 K00981 - gmx:100805363 761.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops9g00294 9 3667076 3672910 Rops9g00294 9 3667076 3672910 ECH