Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g00263 ATGCCAATTAAGGTTTTGGGTAGATACCCATGTCCTATCGTGTCCAATTTTGTTGGCCCTTCCACTTTTACAAGCTTTAAGGTTTCAAGTTATGGAGCAGATTCCAAGTTACTAGGTAGAGCTCGTTTGAGGTGTTTAGGTAGTGGCAGCGGTTGTTTGAGTGAAAGAAATGCTGTTTCCAAAGCCAATTTGAAATTTGTACAGGAATTGTTGGTGAAGAAGGGAATCATATTGGCTGCTACTGTTTGTGGGATATTGGTGTTTGCATGCCCACGAGTTTTTGCTGTTGAAGGGATAGCAAATGCAGGATATGGTGTTATTGGACAGAGTATACTCTTGCTTAAGAATACATGGCCTAAAGTATTGCAAGTTCTTCGTATATTTAAGGAGCAAGGGTTGGTACTTGCAGTGCTTTTGGGTCTTTCAGCTTTTTTCTCTATGGCTGAGACTTCAATTACCACACTTTGGCCTTGGAAGGTTCGTGAATTGGCTGAAAAGGAGTCTGAGAATGGTGTCTTCAGACTACTCCGAAGTGATGTTACTCGATTCCTTACAACAATACTTATTGGCACAACTGTGGTCAATATTGGGGCAACTGCTCTGGTCACAGAAGCTGCAACTGCAATGTTTGGTGAAGCTGGTGTCAGCGCAGCAACAGGAGTGATGACTGTTGCCATTTTGCTTCTCACTGAAATTACTCCAAAAAGTATAGCGGTTCATAATGCCACAGAGGTGGCTCGGTTTGTGGTCAGGCCAGTGGCATGGCTTTCCCTGGTATTGTATCCTGTAGGAAGAATTGTTACTTATCTTTCAATGGGGATGCTGAAATTGCTTGGCTTGAAAGGAAGAAGTGAGCCATATGTAACTGAAGACGAGCTAAAATTGATGCTACGGGGTGCAGAATTAAGTGGGGCAATAGAGGAGGAAGAACAGGATATGATTGAAAATGTATTGGAGATAAAAGACACACATGTCAGAGAGGTTATGACACCTCTTGTTGATGTTGTTGCAATTGATGCAAGTTCAAGCCTTGTAGATTTTCATCACTTGTGGGTCACACATCAGTACTCAAGGGTACCTGTTTTTGAGCAACGTGTTGATAATATAATGGGTATTGCATATGCAATGGATCTGCTGGATTATGTTCAGAAGGGTGAGTTGCTAGAAAGTACTACAGTTGGAGATATGGCTCACAAGCCTGCATATTTTGTACCTGATTCAATGTCTGTTTGGAATCTTCTTAGAGAGTTCCGGATCAGGAAGGTTCACATGGCTGTCGTTCTTAATGAGTATGGTGGAACTGTGGGAATTGTAACTCTTGAAGATGTTGTTGAGGAAATTGTTGGTGAAATCTTTGATGAAAATGACTCAAAGGAGGAGATACAGAAAAAAACTGGCTACATAGTAATGCGAGCTGAGGGTATATTTGACGTGGATGCAAACACATCCATTGATCAACTTTCTGAAGATTTGAACATCAAGATGCCAGAGGGTCACCAATATGAGACAGTATCAGGCTTTGTGTGTGAAGCATTTGGATACATCCCAAGGACAGGTGAGTGCATCAAAGTAATTCTTGAGAGGGAAGATGATGATGATGATAACGGTGAGTCCAATGCTGACCACCAGGATCAGAAAGAGAAGAACCAGATTTTCAAACTTGAGATACTAGCAGGAAATGCCAGAAAAGTGAGCGCTGTTCGGTTTGAAAGGATAAATAATGGCGATGAAATGTTGGAGACTAAAGGAGTAACTCGCTTTCTACCTAAAATCATGAAGAGAAAATGGAGCAGTGGTGAGGACTCGGAGGATGATGTGAAATATGATGGAGATACTTTTGCAAAGAGACCACCACAGGATGACATTTCTCATGAATATGTAGTTGAAGAGGAAAATTCTCATAGGGATTGA 1911 0.4155 MPIKVLGRYPCPIVSNFVGPSTFTSFKVSSYGADSKLLGRARLRCLGSGSGCLSERNAVSKANLKFVQELLVKKGIILAATVCGILVFACPRVFAVEGIANAGYGVIGQSILLLKNTWPKVLQVLRIFKEQGLVLAVLLGLSAFFSMAETSITTLWPWKVRELAEKESENGVFRLLRSDVTRFLTTILIGTTVVNIGATALVTEAATAMFGEAGVSAATGVMTVAILLLTEITPKSIAVHNATEVARFVVRPVAWLSLVLYPVGRIVTYLSMGMLKLLGLKGRSEPYVTEDELKLMLRGAELSGAIEEEEQDMIENVLEIKDTHVREVMTPLVDVVAIDASSSLVDFHHLWVTHQYSRVPVFEQRVDNIMGIAYAMDLLDYVQKGELLESTTVGDMAHKPAYFVPDSMSVWNLLREFRIRKVHMAVVLNEYGGTVGIVTLEDVVEEIVGEIFDENDSKEEIQKKTGYIVMRAEGIFDVDANTSIDQLSEDLNIKMPEGHQYETVSGFVCEAFGYIPRTGECIKVILEREDDDDDNGESNADHQDQKEKNQIFKLEILAGNARKVSAVRFERINNGDEMLETKGVTRFLPKIMKRKWSSGEDSEDDVKYDGDTFAKRPPQDDISHEYVVEEENSHRD* 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g00263 636 Pfam CBS domain 393 448 IPR000644 -
Rops9g00263 636 Pfam CBS domain 325 383 IPR000644 -
Rops9g00263 636 CDD CBS_pair_CorC_HlyC_assoc 324 445 IPR044751 -
Rops9g00263 636 Pfam Cyclin M transmembrane N-terminal domain 134 310 IPR002550 -
Rops9g00263 636 SUPERFAMILY FAD-binding/transporter-associated domain-like 467 575 IPR036318 GO:0050660
Rops9g00263 636 ProSiteProfiles CBS domain profile. 396 454 IPR000644 -
Rops9g00263 636 Gene3D - 458 573 IPR016169 -
Rops9g00263 636 ProSiteProfiles CBS domain profile. 329 390 IPR000644 -
Rops9g00263 636 SMART CorC_HlyC_2 469 573 IPR005170 -
Rops9g00263 636 FunFam Magnesium/cobalt efflux protein CorC 306 456 - -
Rops9g00263 636 Gene3D - 304 457 IPR046342 -
Rops9g00263 636 Pfam Transporter associated domain 470 572 IPR005170 -
Rops9g00263 636 PANTHER HEMOLYSIN-RELATED 126 596 - -
Rops9g00263 636 SUPERFAMILY CBS-domain pair 312 451 IPR046342 -
Rops9g00263 636 MobiDBLite consensus disorder prediction 596 636 - -
Rops9g00263 636 ProSiteProfiles CNNM transmembrane domain profile. 124 310 IPR002550 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g00263 - - gmx:100778907 1096.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops9g00263 9 3295121 3304497 Rops9g00263 9 3295121 3304497 ECH