Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g00190 ATGGCTGGGGTCGTCGAGGATGCTCCTGTCAAGGAACATGATTCCAAAGTTAGCATTGCTGATGACACGGAAGTGAACGATTGTCCCATTGAGCAGGTTAGGCTAACAGTGCCTGTAACCGACGACCCTACTCAGCCAGCACTTACATTCAGGACATGGGTTCTGGGATTGGCCTCATGCATTATCCTTGCTTTTGTGAATGAATTTTTTGGCTACAGAACCAACCCTCTCTCTATTTCTTCTGTCTCAGCACAGATTCTTACCCTCCCACTTGGGAAGCTTATGGCTGCAACACTTCCCACCAAACCAATTCGAATTCCATTGACAAAATGGTCTTTTACCTTGAACCCTGGGCCATTCAATTTGAAAGAACATGCCCTTATCACCATCTTTGCCAGTGCTGGATCTAGTGGTGTTTATGCAATTAACATTATCACAATTGTCAAGGCTTTCTACCACAGGAACATCCATCCACTGGCGGCTTTTTTGTTGGCACTAACAACCCAGATGCTTGGTTATGGATGGGCTGGGATTTTCAGAAAATTCCTTGTTGACTCCCCATACATGTGGTGGCCTTCAAACCTTGTTCAAGTGTCTCTATTCAGGGCATTTCATGAGAAAGAAAAGAGGCCTAAAGGAGGAAACACTAGGCTGCAATTCTTTTTCCTGGTCTTTGTAGCAAGCTTTGCTTATTACATTATTCCAGGCTACTTTTTCCAAGCAATATCAACAATCTCCCTTGTTTGCTTGATTTGGAAAAATTCCATCACTGCACAACAGATTGGTTCGGGCATGAAAGGCCTTGGCATTTTCTCATTTGGCCTAGACTGGAACACGGTTGCAGGGTTCTTAGGCAGTCCTTTGGCTGTACCTGGCTTCGCCATCATCAATGTTTTGGTTGGATTTGCACTATTTGTCTATGTTCTGATTCCCATAGCCTATTGGAACAATGTATATGATGCCAAAAAGTTTCCCCTCATTAGTTCTCACACCTATGACTCCACTGGTGCAACATATAATGTTACTCGGATTCTGAATGACAAAACTTTTGACATTGATATTGAAAGTTATAACAATTACAGCAAGCTCTATCTTAGTATTACGTTTGCATATGACTATGGATTGAGCTTTGCAACTCTTACTGCCACCATTTCACATGTTGCCCTCTTCCATGGAAAAATGATTATTCAGTTGTGGAAGAAGACAACAACAGCACTAAAAGGACAAGTTGGAGATGTGCATACAAGAATTATGAAGAGAAACTATGAGCAAGTCCCTGAATGGTGGTTTGTAAGCATTTTGGTTTTAATGGTTATTTTGGCCTTGCTAGCTTGTGAAGGCTTTGGCAAACAACTCCAACTGCCATGGTGGGGAGTCTTGTTTTCTCTAGCAATTGCGTTAGTTTTCACTTTGCCAATTGGGGTCATTCAAGCAACAACAAATATGCAAACCGGACTAAACGTGATTACAGAGTTGATTATTGGTTACCTTTACCCGGGTAAACCCCTTGCTAATGTAGCCTTCAAGACTTACGGGTACATCAGCATGTCACAGGCACTTGGGTTTCTTGGTGACTTCAAATTGGGCCACTACATGAAAATTCCTCCAAAATCTATGTTCATTGTGCAGTTGGTAGGAACTATAGTTGCTTCATCTGTCTACTTTGGCACAGCATGGTGGCTTCTCACAACTATTCCAAACATCTGTGATGAATCATTGTTGCCAGAGGGTAGTCCATGGACATGCCCTGGTGATGATGTGTTCTATAATGCTTCAATCATATGGGGAGTAGTGGGGCCACAAAGAATGTTTACCAAGGATGGTGTTTACCCTGGGATGAATTGGTTTTTTCTCATTGGTCTACTTGCTCCTGTTCCAGTGTGGTTTTTTGCTCGCAAATTCCCCAACCATAAGTGGATTGAACTCATCAACATGCCCATCATCATTGCAGGTGCTAGTGGCATCCCTCCAGCTAGATCCGTGAACTTCATTACTTGGGGAATTGTTGGAATCTTCTTCAATTTCTATGTTTACAATAAGTTCAAGGCATGGTGGGCAAGACACACTTACATTCTCTCAGCTGCTTTAGATGCTGGAGTTGCATTCATGGGTGTGTTGCTCTATTTCTCCCTCCAATCCTCCAATATTTTTGGTCCAAAATGGTGGGGTCTTGATGCTGATGACCACTGCCCATTGGCCAGATGCCCAACAGCTCCTGGTGTAGTTGCCAAGGGATGTCCTGTTCTCTGA 2250 0.4311 MAGVVEDAPVKEHDSKVSIADDTEVNDCPIEQVRLTVPVTDDPTQPALTFRTWVLGLASCIILAFVNEFFGYRTNPLSISSVSAQILTLPLGKLMAATLPTKPIRIPLTKWSFTLNPGPFNLKEHALITIFASAGSSGVYAINIITIVKAFYHRNIHPLAAFLLALTTQMLGYGWAGIFRKFLVDSPYMWWPSNLVQVSLFRAFHEKEKRPKGGNTRLQFFFLVFVASFAYYIIPGYFFQAISTISLVCLIWKNSITAQQIGSGMKGLGIFSFGLDWNTVAGFLGSPLAVPGFAIINVLVGFALFVYVLIPIAYWNNVYDAKKFPLISSHTYDSTGATYNVTRILNDKTFDIDIESYNNYSKLYLSITFAYDYGLSFATLTATISHVALFHGKMIIQLWKKTTTALKGQVGDVHTRIMKRNYEQVPEWWFVSILVLMVILALLACEGFGKQLQLPWWGVLFSLAIALVFTLPIGVIQATTNMQTGLNVITELIIGYLYPGKPLANVAFKTYGYISMSQALGFLGDFKLGHYMKIPPKSMFIVQLVGTIVASSVYFGTAWWLLTTIPNICDESLLPEGSPWTCPGDDVFYNASIIWGVVGPQRMFTKDGVYPGMNWFFLIGLLAPVPVWFFARKFPNHKWIELINMPIIIAGASGIPPARSVNFITWGIVGIFFNFYVYNKFKAWWARHTYILSAALDAGVAFMGVLLYFSLQSSNIFGPKWWGLDADDHCPLARCPTAPGVVAKGCPVL* 750
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g00190 749 NCBIfam OPT family oligopeptide transporter 32 711 IPR004813 GO:0035673
Rops9g00190 749 NCBIfam small oligopeptide transporter, OPT family 26 715 IPR004648 GO:0055085
Rops9g00190 749 Pfam OPT oligopeptide transporter protein 48 710 IPR004813 GO:0035673
Rops9g00190 749 PANTHER ISP4 LIKE PROTEIN 22 748 IPR004648 GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g00190 Rops-Chr9 2412961 2416478 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g00190 1 749 Organic Solute Cotransporters AT4G26590 67.995 0.0 1080
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g00190 - - gmx:100776230 1377.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops9g00190 9 2412961 2416478 Rops9g00190 9 2412961 2416478 ECH