Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g00153 ATGTTTGGGAGAGGAGCAGTGTCGTCAATTTTGAGGCGCAGCAAAGAAGCATGTTTAATTCACAAGCTAAGAGGGACGAGGAACCCTTTCTCTCATCGTTCCACTGAAGAATCATTCAAGATTTTGAACCCTTCCATTGCCACCCATTGCTTTCGAGCTTTTCGATCTCATCCTATTCCTAAGGGTCATAATGTGCCATACATGAGGAACTTTTCTAGGATGGCATCTACTGGTGCTGAACGTAAGGAGGGGTTGAAACTGCTTGTGACAGGGGGTTCTCATGCCCGAAAAGTGGTTGGAATATGGCTCTTTGGATCTGCAGCATGGGTGTTTAGCATGGTGGTGCTTGGGGGTTTAACCAGACTCACTAGATCTGGTCTTTCAATGACTGATTGGAAATTCACGGGTACTCTCCCTCCTTTGTCTGATGAGGAATGGTTGCAAGAGTTTGAGAAATATAAGCAGTCACCTGAATACAAGCGTGTTAACAGAGGGATGAAGATTGAAGAATTCAAGTTCATATATTGGATGGAATATGCACATCGTATGTGGGGAAGGGCGCTAGGAATTATGTTTGTTTTGCCGTATTCATATTTTCTCCATAAGGGGTATATTACCTTGAGACTAGGACTGAGACTCTCTGCTCTGTTTGCTGTGGGTGCTGGACAGGGTCTCATTGGTTGGTGGATGGTTAAAAGTGGTTTAGAGGAACCACCAACTGAATATTCTCAGCCAAGGGTAAGCCCTTATCGTCTTGCAGCTCACCTTACATCAGCATTTGCCATTTACTGCGGCCTCTTTTGGACTGCACTTTCTGTTGTTATGCCAGAACCACCCACTGAGTCACTAACATGGGTTCGTGGGGCAGCTAAAGTGAGGAGACTTGCGTTGCCTATCAGCCTACTTGTTGGTCTTACTGCTGTCTCTGGTGCATTTGTTGCTGGAAATGATGCTGGGCATGCATTTAATACTTTTCCGAAGATGGGTGATACATGGATACCAGAAGACATTTTTGAAATGAAACCTCTGATTCGAAATTTCTTTGAGAATACATCAACTGTACAGCTTGATCACCGCATCCTTGCAACTGCAACTCTGATTTCAGTGGCTGCTTTATGGTTGTCAACAAGAAAGTTGGACATACATCCTGCAGTACGATCTGTGATTGGAGGTGCCGTTGGCATGGCAGCTCTTCAGGTCACCTTGGGAGTTTCGACGCTTCTTTCATATGTACCTGTTTCACTTGGTACTGCACATCAGGCTGGAGCCTTAACACTTCTGACGTTTATGCTACTGCTTAATCACACAGTTCGAAGGCCGCCCTTGTCCCTTCTCAAATCTCTGCCTCAGGTTGTCAAAGCAAACTAA 1368 0.4518 MFGRGAVSSILRRSKEACLIHKLRGTRNPFSHRSTEESFKILNPSIATHCFRAFRSHPIPKGHNVPYMRNFSRMASTGAERKEGLKLLVTGGSHARKVVGIWLFGSAAWVFSMVVLGGLTRLTRSGLSMTDWKFTGTLPPLSDEEWLQEFEKYKQSPEYKRVNRGMKIEEFKFIYWMEYAHRMWGRALGIMFVLPYSYFLHKGYITLRLGLRLSALFAVGAGQGLIGWWMVKSGLEEPPTEYSQPRVSPYRLAAHLTSAFAIYCGLFWTALSVVMPEPPTESLTWVRGAAKVRRLALPISLLVGLTAVSGAFVAGNDAGHAFNTFPKMGDTWIPEDIFEMKPLIRNFFENTSTVQLDHRILATATLISVAALWLSTRKLDIHPAVRSVIGGAVGMAALQVTLGVSTLLSYVPVSLGTAHQAGALTLLTFMLLLNHTVRRPPLSLLKSLPQVVKAN* 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g00153 455 Pfam Cytochrome oxidase assembly protein 101 430 IPR003780 GO:0006784|GO:0016020|GO:0016653
Rops9g00153 455 Hamap Heme A synthase [ctaA]. 96 440 IPR023754 GO:0006784|GO:0016020|GO:0016653
Rops9g00153 455 PANTHER CYTOCHROME C OXIDASE ASSEMBLY PROTEIN COX15 75 453 IPR023754 GO:0006784|GO:0016020|GO:0016653
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g00153 Rops-Chr9 1862914 1866697 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g00153 K02259 - gmx:100786107 772.311
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops9g00153 9 1862914 1866697 Rops9g00153 9 1862914 1866697 ECH