Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g00149 ATGGGAGTAGCAGCTGCAGAATCAAGTGAGAACATGCCCTTGTTACTCACCCAATCTCATCCTTTCAAAAGAACAGGGACTGTGTGGACAGCAGTGGCACACATAGTGACAGGGGTGATAGGATCAGGAGTGCTGTCTCTGCCATGGAGCATTGCACAGCTTGGTTGGCTTGCTGGTCCTTTCTCCATTCTCATCATTGCTTCCTCAACTCTCTTCTCTGCTTTTCTTCTCTGTGATACCTATCGTTCCCCTGACCCAGAATTGGGTCCTACCAGGAGTGCCTCTTATCTTGATGTTGTCAATTTGCATTTAGGAATCAAGAATGGATGGCTCTGTGGCCTTCTTGTGAATATATGTTTATATGGCTTTGCAATTGCCTTCGTCATTACAACAGCTATCAACTTAAGAGCAATCCAAAATTCAATTTGTGACCACAACGAAGGGCCTGAAGCAGCATGTGAATTTGTAGATGCATATTATATGTTACTCTTTGGGATTGTCCAAGTTGTTCTCTCACAGATACCCAACTTCCATAACATCAAATGGCTGTCGGTTGTTGCTACAATTATGTCCTTTGCTTATTGTTTCATAGGATTGGGGCTTTCCATCGTGCAAATCATAGGAAAAGGACATGCTGAGGGTAGCATTGAAGGAGTCAGTACCTCTAGTGGAATTGAAAAGTTATGGCTGGTTTCTCAAGCTCTTGGTGATGTATCATTCTCATATCCATTCTCAACAATTCTTATGGAAATACAGGATACTTTGAAGTCACCTCCACCAGAAAACCAAACCATGAAGAAAGCCTCAACAATATCAGTCACTGTCACAACACTCTTCTACCTTAGCTGTGGATGTGCTGGATATGCTGCCTTTGGTAGTGATACACCAGGAAACCTTTTAACAGGATTTGGATCCTCCAAGTCTTATTGGCTTGTGAACTTTGGTAACGCTTGTATAGTGGGTCACCTAGTTGGTTCATATCAGGTGTATAGCCAGCCACTTTTTGCCACTGTTGAGAATTGGTTCCGTTTTAAATTCCCAGACAGTGAATTTGTGAATCACACATATATCTTGAAACTCTCATTGCTGCCAGCTTTTGAACTAAATGTTCTCAGCCTATCTTTCCGAACTGCTTATGTTGCATCAACGACTGTGATAGCAATGATCTTTCCATACTTCAATCAAATTTTGGGAGTTTTGGGTAGCATAAGCTTTTGGCCATTAACCATATATTTTCCAGTGAAAATATACTTGAGTCGGTCCAGTACTGATGCATGGACGGCTAAGTGGGTCATGCTTAAAACTTTCAACCTTTTTGGCTTTGTGTTTGGATTGTTCACTCTCACTGGATGCATTAGAGGAATAGTAACTGAAAAAATAGGACGAGAAGCTTGA 1395 0.4172 MGVAAAESSENMPLLLTQSHPFKRTGTVWTAVAHIVTGVIGSGVLSLPWSIAQLGWLAGPFSILIIASSTLFSAFLLCDTYRSPDPELGPTRSASYLDVVNLHLGIKNGWLCGLLVNICLYGFAIAFVITTAINLRAIQNSICDHNEGPEAACEFVDAYYMLLFGIVQVVLSQIPNFHNIKWLSVVATIMSFAYCFIGLGLSIVQIIGKGHAEGSIEGVSTSSGIEKLWLVSQALGDVSFSYPFSTILMEIQDTLKSPPPENQTMKKASTISVTVTTLFYLSCGCAGYAAFGSDTPGNLLTGFGSSKSYWLVNFGNACIVGHLVGSYQVYSQPLFATVENWFRFKFPDSEFVNHTYILKLSLLPAFELNVLSLSFRTAYVASTTVIAMIFPYFNQILGVLGSISFWPLTIYFPVKIYLSRSSTDAWTAKWVMLKTFNLFGFVFGLFTLTGCIRGIVTEKIGREA* 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g00149 464 Pfam Transmembrane amino acid transporter protein 24 455 IPR013057 -
Rops9g00149 464 PANTHER OS05G0424000 PROTEIN-RELATED 27 447 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g00149 Rops-Chr9 1836643 1840869 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g00149 4 458 Organic Solute Cotransporters AT1G10010 46.841 1.98e-147 427
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g00149 K24917 - gmx:100788056 779.245
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops9g00149 9 1836643 1840869 Rops9g00149 9 1836643 1840869 ECH