Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g00059 ATGAAGCAAGCACCACCACTTGTGTTCTTCTTTCTCATAGCACTTCTTTCCTACACTGCCAATGGCGTTGGCCATAACATCACTCGCATACTTGCCGACCACCCTGGATTCTCCACCTTCAGTCACTACCTCACTGTCACCCACCTCGCCGGCGAGATCAACCGCCGCCAAACCATCACCGTGCTGGCCATCGACAATGCCGGCATGTCATCTCTCCTAGACAAGCACCTCTCCATCACCACCCTCAAAAACGTCCTATCCCTCCACGTTTTGGTCGATTACTTCGGTGCCAAAAAGCTTCACCAGATTACAAACGGAACCACCTTGGTTTCCTCCATGTTTCAGGCAACAGGAGCAGCTGCTGGCACTGCAGGTTACGTCAACATCACCAACCTCAAAGGAGGGAAAGTGGGGTTTGCATCAGAAGATAACGATGGCCTCCATTCGTTCTATGTCAAATCTGTTAAGGAAATTCCATATGTTATCTCTATCCTTCAAATCAGTCAACCCTTGAGTTCTGCAGATGCAGAAGCACCAACAGCAGCACCTAGCCAAATAGACCTTATCTCAATCATGTCCAAACAAGGTTGCAAAGCCTTTGCAGACTTGTTGAGAACTTCCAAAGCTCTCCCCACTTTCAAGGAAAATGTCGATGGTGGTTTGACCGTGTTTTGCCCCACTGACAGCGCGGTCAACGGTTTCATGCCTAAGTACAAGAATCTGACTGATGCTCAGAAAGTGTCATTGCTGTTATATCATGGAGTCCCTGTTTACCAGTCCTTGCAAATGTTGAAATCCAGCAACGGGGTTGTGAACACTTTGGCTACTGAAGGTGCCAACAAGTATGATTTTACAGTGCAAAATGATGGGGAAGATGTGGAACTGGAAACAAAAGTTAACACTGCAGGCATAGTAGGTACATTGATAGATCAAGACCCTTTTGTGGCTTATAAGATTAGCAAGGTCTTGATGCCAAGAGAGTTGTTTAAGGAGGATCTGGCACCTGCAGAGTCACCAAAGCCAGCAAAGAAGAAGAAGAAGAAGGGTGAGGCAGCTGATGAACCAGCAGCAGATGGGCCTGGAGCAGAAGCAGATGATCAGAAAGCTGCTGATGATAATGGGGTAAGTGGACTCAACAATGAGTTCAGATTCATGATGGTGTTCTTGAGTTTGATTATTGGGGTTTTGGTTCTATAA 1197 0.4678 MKQAPPLVFFFLIALLSYTANGVGHNITRILADHPGFSTFSHYLTVTHLAGEINRRQTITVLAIDNAGMSSLLDKHLSITTLKNVLSLHVLVDYFGAKKLHQITNGTTLVSSMFQATGAAAGTAGYVNITNLKGGKVGFASEDNDGLHSFYVKSVKEIPYVISILQISQPLSSADAEAPTAAPSQIDLISIMSKQGCKAFADLLRTSKALPTFKENVDGGLTVFCPTDSAVNGFMPKYKNLTDAQKVSLLLYHGVPVYQSLQMLKSSNGVVNTLATEGANKYDFTVQNDGEDVELETKVNTAGIVGTLIDQDPFVAYKISKVLMPRELFKEDLAPAESPKPAKKKKKKGEAADEPAADGPGAEADDQKAADDNGVSGLNNEFRFMMVFLSLIIGVLVL* 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g00059 398 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 8 371 IPR033254 -
Rops9g00059 398 Pfam Fasciclin domain 197 325 IPR000782 -
Rops9g00059 398 Pfam Fasciclin domain 36 112 IPR000782 -
Rops9g00059 398 FunFam Fasciclin-like arabinogalactan protein 10 177 326 - -
Rops9g00059 398 FunFam Fasciclin-like arabinogalactan protein 2 23 164 - -
Rops9g00059 398 ProSiteProfiles FAS1/BIgH3 domain profile. 24 190 IPR000782 -
Rops9g00059 398 ProSiteProfiles FAS1/BIgH3 domain profile. 184 323 IPR000782 -
Rops9g00059 398 MobiDBLite consensus disorder prediction 333 354 - -
Rops9g00059 398 SUPERFAMILY FAS1 domain 181 326 IPR036378 -
Rops9g00059 398 SUPERFAMILY FAS1 domain 30 145 IPR036378 -
Rops9g00059 398 Gene3D FAS1 domain 24 158 IPR036378 -
Rops9g00059 398 Gene3D FAS1 domain 188 325 IPR036378 -
Rops9g00059 398 SMART fasc_3 222 326 IPR000782 -
Rops9g00059 398 MobiDBLite consensus disorder prediction 333 372 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g00059 Rops-Chr9 797010 798462 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g00059 - - gmx:100799605 545.043
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops9g00059 9 797010 798462 Rops9g00059 9 797010 798462 ECH