Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g04195 ATGACATTGCTCATTCCTTGTTTTAGTGGATCTATGGCTAATCATTCTTTAGTTTTGGATAATACTTCTGTTACTATAGCAGAACATCCATTAGTCATTGGTCAAGAGTTTCCAGATGTGGAAACCTGCCGAAGAACATTGAAAGATATTGCCATAGCTATGCATTTTGATCTTCGGATAGTTAAGTCAGATCGCAGTCGGTTTATAGCAAAATGCTCCAAAGAAGGGTGCCCATGGCGTGTCCATGTAGCAAAATGTCCTGGTGTTCCAACTTTTACTATAAGAACCCTACAAGGAGACCATACTTGTGAGGGAGTTCGCAACCTTCATCATCAGCAGGCATCAGTAGGTTGGGTTGCAAGATCTGTTGAAGCACGCATTCGAGATAATCCACAATACAAACCAAGGGAAATACTGCAAGATATTCGTGATCAGCATGGAGTTGCTGTTTCTTACATGCAAGCTTGGCGTGGGAAGGAGCGGAGCATGGCTGCACTCCATGGAACATTTGAAGAAGGTTACCGTGTTCTCCCTGCATACTGTGAGCAAATAAGGAAAACCAACCCTGGTAGCATAGCATCTGTTGTTGCCACTGGACAAGAAAATTGTTTTCAACGCCTGTTTATTTCTTATCGTGCATCAATTTATGGGTTTATAAATGCTTGTAGGCCTCTTTTAGAGCTTGACAGAGCGCATCTTAAAGGAAAATACCTAGGTATATTACTTTGTGCTGCAGCTGTTGATGCTGATGATGCTTTGTTTCCTTTGGCTATTGCTGTTGTTGATGTTGAAAGTGATGAAAACTGGATGTGGTTCATGTCAGAATTGCGAAAACTTCTAGGAGTAAACACTGACACCATGCCTAGACTGACAATACTATCTGAAAGGCAGAGAGGCATGGTGGAGGCAGTAGAAACACATTTTCCTAGTGCTTCACATGGTTTCTGTCTGCGTTATGTCAGTGAAAATTTTCGCGATACATTTAAAAACACGAAGTTGGTGAACATCTTTTGGAATGCTGTTTATGCGCTCACAGCTGCTGAATTTGAAAGCAAGATTACTGAGATGATAGAAATTTCACAGGATGTTATATCATGGTTTCAACAGTTTCCTCCCTATCTTTGGGCTGTGGCATACTTTGATGGTGTTCGATATGGCCATTTCACACTTGGGGTAACAGAATTGTTGTATAACTGGGCCCTTGAATGTCATGAGCTCCCTGTGGTGCAGATGATGGAACACATCCGCCACCAGATGACATCTTGGTTTAATGAACGTCAGGATATGGGCATGAGGTGGACGTCAATTCTTGTACCATCTGCTGAGAAGCGGATTATGGAGGCAATTGCTGATGCTCATTGCTATCAAGTACTCCGGGCAAATGAAGTTGAGTTTGAAATTGTGTCAACTGAGAGGACCAATATTGTGGATATACGAAGTCGTGAGTGCTCTTGTCGTCGATGGCAGTTATATGGTTTACCTTGTGCTCATGCTGCTGCTGCTCTCATTTCTTGTGGACACAATGCCCATATGTTTGCTGAGCCATGCTTCACTGTACAAAGTTACAGAATGACCTATTCACAGATGATAAATCCTATTCCAGATAAGAGTCAATGGAGAGAACAAGGAGAAGGAGCAGAAGGTGGAGGCGCAAAGGTTGATATCATAATTCGCCCACCAAAGACTCGCCGACCACCTGGAAGGCCTAAAAAGAAGGTTCCGAGAGTGGAGAATTTTAAGCGTCCCAAAAGAGTTGTTCAATGTGGTCGCTGTCATATGTTAGGACATTCTCAAAAGAAATGCACAATGCCCATTTGA 1818 0.4263 MTLLIPCFSGSMANHSLVLDNTSVTIAEHPLVIGQEFPDVETCRRTLKDIAIAMHFDLRIVKSDRSRFIAKCSKEGCPWRVHVAKCPGVPTFTIRTLQGDHTCEGVRNLHHQQASVGWVARSVEARIRDNPQYKPREILQDIRDQHGVAVSYMQAWRGKERSMAALHGTFEEGYRVLPAYCEQIRKTNPGSIASVVATGQENCFQRLFISYRASIYGFINACRPLLELDRAHLKGKYLGILLCAAAVDADDALFPLAIAVVDVESDENWMWFMSELRKLLGVNTDTMPRLTILSERQRGMVEAVETHFPSASHGFCLRYVSENFRDTFKNTKLVNIFWNAVYALTAAEFESKITEMIEISQDVISWFQQFPPYLWAVAYFDGVRYGHFTLGVTELLYNWALECHELPVVQMMEHIRHQMTSWFNERQDMGMRWTSILVPSAEKRIMEAIADAHCYQVLRANEVEFEIVSTERTNIVDIRSRECSCRRWQLYGLPCAHAAAALISCGHNAHMFAEPCFTVQSYRMTYSQMINPIPDKSQWREQGEGAEGGGAKVDIIIRPPKTRRPPGRPKKKVPRVENFKRPKRVVQCGRCHMLGHSQKKCTMPI* 606
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g04195 605 Pfam MULE transposase domain 226 323 IPR018289 -
Rops8g04195 605 Pfam SWIM zinc finger 472 505 IPR007527 GO:0008270
Rops8g04195 605 Pfam MuDR family transposase 31 94 IPR004332 -
Rops8g04195 605 ProSiteProfiles Zinc finger SWIM-type profile. 465 506 IPR007527 GO:0008270
Rops8g04195 605 PANTHER POLYPROTEIN, PUTATIVE-RELATED 29 573 - -
Rops8g04195 605 SMART 26again6 481 508 IPR006564 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g04195 Rops-Chr8 84375608 84379648 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g04195 - - gmx:100808214 1140.56
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g04195 8 84375608 84379648 Rops8g04195 8 84375608 84379648 ECH