Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g04184 ATGGCTGGAAAGATTGATCCCTTAGAAAAAGTCATTCCTAAAAGCGAATGTTGGCGCTTGAAGCACCCTGTAGTCGTGGTACAATATGCTAGGGTGAAAACTTTCAGAGGGAAGACTGTTTTACAGAATGTTATCTATGGGACTAGAATAATTTTTGATCCTGAAATACTTGAAGCTGAATATTTGAAGAATAGTATTGCATTGTCTTTGGATGAAAACTCTCAAAGTCTGACGAGAATCCCTGATTCTGAGAACTATTGTCTTGAGTATGATTTTTTGAAATTTACTCCAAGAAAGTCAATTGATGAATTGAAAGATTGCATGTACTATTGTGATAATTGCTACTGTCATGTGGTTAATGTCATTCCAAGGTATAGGATAAAGGTTAAAGTCATGGACAAGACTGACAACACTGTGTTTATATGTGATAAAGATGGATATGCTATTCTAGGGAAATCTTGCTCTGAAATACTTGATTCTATTCAAATGAATGAAGGACACCTTGGGTTCCCTGTTGAATTTGAGGAACATTTGATAGAGAAAACCTTCATGTTCAAAATTGGTGTTAAGACCTCAATTTCGTCTAATTTTGAACCTTCTTTCAAGGGCTTTCTCTTGATGACACTTTTTTTTCATTCAGAGTTTGGAGATGTTCAATCTGCTATGGCAAAGGAATTTGTGATCCAGTTATCTGATGATAATTTGTGCCTTGCATCTCAAGCTCAGTTGAATGTTCCAGTTGATGTAACTCTGACAAGGTCAACTGTAAAAGTTTCGGCTAGCTCTGATGATGCTCCACTTGGCTCTCACCCACGCCGCAAGTGTCAGGTCACACTTGGATGCGCAGGCACTTCCAATGTATGTAACATAAAAGTAGGCCTTACCACGGTTACAGGATATGCAAGGTTTCACAGAACAAGGTTGTTTCAATATCCTTCTAGTGTGGCAGTGCTAAAAGCATTGTGCACCACCAGAAAGCCAACACGCTTGCACTTGTTAAGACCTTATCACCGCCATTCTTACAGTTTGGGGTGGCAAAGCAACAAAGCGAAAGGAGATTCTTCTCCCACTTCCACAAACATTCCCCGGATGTTCGAATTTGCTGTCAATCGAATGCTTGTTTTTCTCAAAGATTGGAGTTATGTACGTACCATGGAAGTAGCTGGCATATTGGTATGCATTTTAATGATCGTTCCATCAGCTGATGCTGTTGATGCTCTCAAAACTTGTACTTGTTTGCTGAAGGAATGCAGGATAGAACTAGCTAAGTGTCTTTCAAACCCATCATGTGCTGCCAATATTGCTTGTCTTCAAACTTGCAACAATAGACCTGATGAGACTGAATGCCAAATTAAATGCGGAGACTTGTTTGAAAACAATGTGGTTGATGAATTCAATGAGTGTGCAGTCTCACGAAAGAAATGTGTACCTATGAAATCTGACGTGGGAGAATTTCCTGCTCCAAATCCTGATGTCCTTGTTAAGAGCTTTAACATTGCAGATTTCAGTGAATCCAACAAACTTGTGGGCAATTTGTCATGGAGAATACCAACTCCAGATGCTGGATTTCTTACAAGGTCAGCTGTGCAGAGATTTGTGCAAGATCCTACTTATCCCGGAATCCTCTACAATCATGATAACGAGTATCTTCACTATCAAGATGACTGGTATATTTTGTCATCCAAGATTGCGAATGAACCTGATGATTACGTATTTGTATACTACCGAGGCAGAAATGATGCATGGGATGGCTATGGTGGTGCTGTTTTGTACACAAGAAGTAGAGTTTTGCCTGAATCTATCATTCCTGAACTTGATAGAGCAGCTAAGAGTGTGGGAAGAGACTTCAGCAAGTTCATCAGAACAGATAATACATGTGGACCAGAGCCTTCATTGGTGGAGAGGCTGGAGAAAAAGGTAGAGGAAGGAGAGGAGACCATTGTGAGGGAAGTGGAACAGTTAGAAGAAGAGGTAGAAAAGGTGGGGAAAACAGAGATGACCTTGTTTCAGAGGTTGGCAGAAGGGTTCAAAGTATTTCAAGAAGATGAGGAAAATTTCTTAAGAGAGCTATCAAAAGAAGAAATGGACGTCCTTAACGGGCTCAAAATGGAAGCTGCTGAAGTAGAAAAGATCTTTGGAAGTGCCTTGCCGATAAGGAAACTAAGATAA 2169 0.4002 MAGKIDPLEKVIPKSECWRLKHPVVVVQYARVKTFRGKTVLQNVIYGTRIIFDPEILEAEYLKNSIALSLDENSQSLTRIPDSENYCLEYDFLKFTPRKSIDELKDCMYYCDNCYCHVVNVIPRYRIKVKVMDKTDNTVFICDKDGYAILGKSCSEILDSIQMNEGHLGFPVEFEEHLIEKTFMFKIGVKTSISSNFEPSFKGFLLMTLFFHSEFGDVQSAMAKEFVIQLSDDNLCLASQAQLNVPVDVTLTRSTVKVSASSDDAPLGSHPRRKCQVTLGCAGTSNVCNIKVGLTTVTGYARFHRTRLFQYPSSVAVLKALCTTRKPTRLHLLRPYHRHSYSLGWQSNKAKGDSSPTSTNIPRMFEFAVNRMLVFLKDWSYVRTMEVAGILVCILMIVPSADAVDALKTCTCLLKECRIELAKCLSNPSCAANIACLQTCNNRPDETECQIKCGDLFENNVVDEFNECAVSRKKCVPMKSDVGEFPAPNPDVLVKSFNIADFSESNKLVGNLSWRIPTPDAGFLTRSAVQRFVQDPTYPGILYNHDNEYLHYQDDWYILSSKIANEPDDYVFVYYRGRNDAWDGYGGAVLYTRSRVLPESIIPELDRAAKSVGRDFSKFIRTDNTCGPEPSLVERLEKKVEEGEETIVREVEQLEEEVEKVGKTEMTLFQRLAEGFKVFQEDEENFLRELSKEEMDVLNGLKMEAAEVEKIFGSALPIRKLR* 723
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g04184 722 Gene3D - 94 202 IPR012340 -
Rops8g04184 722 Gene3D - 502 636 IPR012674 -
Rops8g04184 722 Coils Coil 633 664 - -
Rops8g04184 722 Gene3D - 12 73 IPR012340 -
Rops8g04184 722 SUPERFAMILY Nucleic acid-binding proteins 101 193 IPR012340 -
Rops8g04184 722 SUPERFAMILY Lipocalins 504 630 IPR012674 -
Rops8g04184 722 Pfam VDE lipocalin domain 503 624 IPR010788 GO:0046422
Rops8g04184 722 PANTHER VIOLAXANTHIN DE-EPOXIDASE, CHLOROPLASTIC-RELATED 504 710 IPR044682 GO:0010028|GO:0046422
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g04184 Rops-Chr8 84330082 84337404 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g04184 K09839 - gmx:100816085 675.626
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g04184 8 84330082 84337404 Rops8g04184 8 84330082 84337404 ECH