Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g04175 ATGGGTATTGTTGGAAGGAAAAGAAGTTGTTCCCGTTCCCCTCCTCATCTTCTCCTTCTGATCAGTTTCTTGCTCCCTTTCCTTCTACAAACTGTTGCAGTAGAATCCAGCACCCTAAATTACACAAGGTATATGCAAGTTAGTAGCCTTAGATTTGAAAGGATTCAGAGGCACTTGGACAAGATTAACAAGCCCCCTGTCCTCACCATAGAGAGTCCAGATGGTGATCTCATAGATTGTGTTCACAAAAAAAAGCAACCAGCTTTAGATCACCCCCTTTTAAAGAATCACAAGATCCAGAAGGTGCCAACAAAGATGCCAAGGGGGATGAATGTGCAGAAAGAAGAGAATAGGATAGAGGGTGTGAGTGGTGGCGCATGGCAAATGTGGCACCAAAATGGGACAAGGTGCCCAAAGGGAACCGTTCCCATACGGCGGAGCACGGTGCATGACGTGTTGAGAGCCAAGTCTTTATATGACTTCGGCAAAAAACAACGACGGTTGTCTCATCTCTTCCGCCGTAGCGACGCCCCCGATGTAGTCAGCGGCAATGGCCATGAGCATGCTATTGCGTTCACAGAAGCATCCCAAGAGATGTACGGGGCAAAGGCGACAATAAATGTGTGGGCCCCATCGATAGAAGTAGTCAATGAGTTCAGTCTCTCTCAAATTTGGATTCTTTCTGGATCCTTTGATGGCTCGGATCTCAACAGCATTGAAGCTGGATGGCAGGTCAGTCCGGAGCTTTATGGTGACAGCAGGCCCAGATTATTCACTTACTGGACGAGTGACTCATATCAAGCAACCGGATGCTACAACCTTCTTTGTTCGGGTTTTGTGCAAACAAATAGCAGGGTAGCCATTGGAGCAGCCATTTCTCCTATCTCATCTTATGATGCAAACCAATTTGACATTACCATCCTTATTTGGAAGGATCCAAAAGTGGGGAATTGGTGGATGAGTTTTGGTGACAGCACATTGGTAGGGTATTGGCCAGCAGAGTTATTCACACACTTAGCAGAGCATGCAACCATGGTGGAGTGGGGTGGTGAGGTGGTGAACACACGTGCCAATGGTGAACACACCTCAACCCAAATGGGTTCTGGCCATTTTGCTGAGGATGGTTTTGGAAAAGCAAGCTACTTTAGGAACCTTGAAATCGTAGACACAGATAACAGTCTCAGCTCAGTGCACAACATCTTAACCCTTGCTGAGAACACAAACTGTTATGACATCAAGAGCTCCTATAACAACAAATGGGGCACACACTTCTACTATGGTGGACCAGGCAACAATCCTCAATGCCCCTGA 1311 0.4676 MGIVGRKRSCSRSPPHLLLLISFLLPFLLQTVAVESSTLNYTRYMQVSSLRFERIQRHLDKINKPPVLTIESPDGDLIDCVHKKKQPALDHPLLKNHKIQKVPTKMPRGMNVQKEENRIEGVSGGAWQMWHQNGTRCPKGTVPIRRSTVHDVLRAKSLYDFGKKQRRLSHLFRRSDAPDVVSGNGHEHAIAFTEASQEMYGAKATINVWAPSIEVVNEFSLSQIWILSGSFDGSDLNSIEAGWQVSPELYGDSRPRLFTYWTSDSYQATGCYNLLCSGFVQTNSRVAIGAAISPISSYDANQFDITILIWKDPKVGNWWMSFGDSTLVGYWPAELFTHLAEHATMVEWGGEVVNTRANGEHTSTQMGSGHFAEDGFGKASYFRNLEIVDTDNSLSSVHNILTLAENTNCYDIKSSYNNKWGTHFYYGGPGNNPQCP* 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g04175 436 Pfam Neprosin activation peptide 69 191 IPR025521 -
Rops8g04175 436 FunFam Putative carboxyl-terminal proteinase 208 328 - -
Rops8g04175 436 Gene3D - 210 328 - -
Rops8g04175 436 PANTHER PROTEIN, PUTATIVE (DUF239)-RELATED-RELATED 55 432 - -
Rops8g04175 436 Pfam Neprosin 217 429 IPR004314 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g04175 Rops-Chr8 84063059 84068122 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g04175 - - gmx:100789333 755.747
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g04175 8 84063059 84068122 Rops8g04175 8 84063059 84068122 ECH