Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03933 ATGATAGCCCTTGTACTCTTTCTACTAACTGGTCTTGGTCTAGTAATCAATGCATCAGCCCTTGTTGCTTGTTCAAATTGTGGTGACTTTGCAGTTCCATACCCACTCAGCTCTAAGGAGGATTGCGGGGACAAAAGGTACAAAGTCTACTGCAACAATGGTAGCTTAGAGTTCTTGTCAGCTACAGGAACTTACTATAAGATCCTTAGAATTGACCCAAGTGCTAACAAGCTTGTCATTAGTCCACCCCTCATACTCAAAGACACTTGTTATTCTTCTGATGTCTCTATGGGAGGCTTAATGCTTGATGAAAGCTTGCCCTTCAATATATCTACACATAATACTGTCATGTTGTTTAATTGCTCTGATAATATCCTTCTGTCTCCACTCAACTGTTCTTCAAACAGTATATGTAGGCAGTTTGAGGAAAAGGTGGAGGAGGGACATGGGTGTATGAGCACCCTTTGTTGCCATTACTTAAAAGACTCTGCCATGAATTCCCATAAGATCAGAGTTAGGGTTGGGAGTTGCACTGCTTACACTTGTTTGGTGGATTTCAAGCCTGATGATCCTGTTGATTCTTGGAATTATGGGATTGAGCTGCAATGGCTGCCTCCTAATTGA 624 0.4183 MIALVLFLLTGLGLVINASALVACSNCGDFAVPYPLSSKEDCGDKRYKVYCNNGSLEFLSATGTYYKILRIDPSANKLVISPPLILKDTCYSSDVSMGGLMLDESLPFNISTHNTVMLFNCSDNILLSPLNCSSNSICRQFEEKVEEGHGCMSTLCCHYLKDSAMNSHKIRVRVGSCTAYTCLVDFKPDDPVDSWNYGIELQWLPPN* 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03933 207 Pfam Wall-associated receptor kinase galacturonan-binding 24 80 IPR025287 GO:0030247
Rops8g03933 207 PANTHER WALL-ASSOCIATED RECEPTOR KINASE CARBOXY-TERMINAL PROTEIN-RELATED 9 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g03933 Rops-Chr8 80479078 80479701 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g03933 24 207 Receptor kinase-like Gene Family AT5G02070 37.895 1.32e-36 133
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03933 - - tpra:123890956 357.066
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g03933 8 80479078 80479701 Rops8g03933 8 80479078 80479701 ECH