Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03927 ATGAAGACAGGCTCCATGATTTTTTCGTTATTGCAAGTACCTAGATGCGGAATACACAGCTTAGCTAATTATTGGGGTGAAACCTTCCACAGCTTCAGTAAGACCTGTGGAAACAATTCTAGTGTCAGACTTCTCGGTTCTAGAATTCATGGGCTTCAGGGAGGACACAGAAAGAAGTGGACTCGAAGACCTATAACTACAAATACTGAAGGCCAGGGGAGCACCAAATCAAGAAGTACCAAGCATGAAATTTTGAGTGAAACAATTTTAACTAGTTCCACAGTAAATGTAAATAAAACACAGCTAGGTGAATTTCAGGAAATTCAGTACTGTGACATACAACAAGAGATTGCTCAGAATAAAGACTTGTCTAGCTTAGTCACTGTTATTGTTTTTGATATTGAGACCACTGGGTTCAGCAGACAGAATGAACGAATCATTGAGATTGCACTTCGAGACCTTCAGGGTGGTACAAACAGCACTTTTCAAACTCTTGTAAATCCTCAACGCAATGTTCCTAATTCAGATATTCATGGCATTACTACTCAAATGGTGAACAAACCTGATGTTCCAAGGATGGAGGACCTGATTCCCATCTTATTGCACTACGTTCGAAGCCGTGAGAAACCTGGGGGATATGTGTTATGGGTTGGTCATAATGCTCGTTGTTTTGATGTACCCTTCATCATCAATGAGTTACGTCGTTCTTCTATGAAGATTCCTCCTAATTGGCTCTTTGTGGACACACTTCCTTTGGCACGTGAACTAATGAAATCTGGAGGGAAAAAACTTACTTCAACATCCCTTGCTGCCCTTCGTGAACTCTACAGTATTAAAGTGGATGGATCAGCACACAGGGCCATGGTAGATGTGAACACATTGACCTTGATTCTTCCCAGGTTGACCTTTGATCTGAAATTGACCCTATCTGACCTTGTCAAAAAATCATTCACAGAATCAGATATTGTCAACTCTAAGAAGAAGAAGAATTCAAACTAG 999 0.4054 MKTGSMIFSLLQVPRCGIHSLANYWGETFHSFSKTCGNNSSVRLLGSRIHGLQGGHRKKWTRRPITTNTEGQGSTKSRSTKHEILSETILTSSTVNVNKTQLGEFQEIQYCDIQQEIAQNKDLSSLVTVIVFDIETTGFSRQNERIIEIALRDLQGGTNSTFQTLVNPQRNVPNSDIHGITTQMVNKPDVPRMEDLIPILLHYVRSREKPGGYVLWVGHNARCFDVPFIINELRRSSMKIPPNWLFVDTLPLARELMKSGGKKLTSTSLAALRELYSIKVDGSAHRAMVDVNTLTLILPRLTFDLKLTLSDLVKKSFTESDIVNSKKKKNSN* 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03927 332 Pfam Exonuclease 130 295 IPR013520 -
Rops8g03927 332 FunFam Exonuclease DPD1 chloroplastic/mitochondrial 127 311 - -
Rops8g03927 332 SMART exoiiiendus 128 307 IPR013520 -
Rops8g03927 332 SUPERFAMILY Ribonuclease H-like 126 304 IPR012337 -
Rops8g03927 332 CDD DEDDh 130 298 - -
Rops8g03927 332 PANTHER THREE PRIME REPAIR EXONUCLEASE 1, 2 56 326 IPR040393 GO:0008408
Rops8g03927 332 Gene3D - 127 316 IPR036397 GO:0003676
Rops8g03927 332 MobiDBLite consensus disorder prediction 56 81 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g03927 Rops-Chr8 80392940 80396586 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03927 - - gmx:100799702 531.176
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g03927 8 80392940 80396586 Rops8g03927 8 80392940 80396586 ECH