Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03913 ATGGCTCTGCTATTTCTCTCGACGGTTTCAGCCGACGACGTCGTTGTGCTCACAGAGGACACCTTCGAAAAAGAAGTTGGCAAGGATCGCGGCGCTCTCGTCGAATTTTATGCTCCCTGGTGTGGACATTGTAAAAGGCTCGCCCCAGAGTATGAAAAACTCGGAGCAAGTTTTAGAAAAACAAAGTCTGTTTTGATTGGAAAGGTGGACTGCGACGAACATAAAAGCGTTTGCAGTAAATTTGGGGTTTCTGGTTACCCTACAATTCAGTGGTTTCCTAAGGGATCTCTAGAGCCAAAAAAGTATGAAGGTGCACGTACTGCAGAAGCCCTTGTTGCGTTTGTGAACGTTGAAGCAGGTACCAATGCGAAGCTAGCTTCTGTTCCATCCAGTGTGGTAGTTCTCTCTTCAGATAACTTTGATGAGGTTGTCTTGGATGAAACAAAAGATGTCCTGGTGGAGTTCTACACACCATGGTGTGGTCATTGCCAGGCCCTTGCTCCTACATACGAAAAGGTTGCTGCAGCATTTAAACTGGAGGAAGAAGTAGTTATAGCCAATGTTGATGCTGACAAGTACAAAGATTTGGCTGAGAAATATGGTGTTAGTGGCTATCCCACACTGAAGTTTTTCCCAAAGAGCAATAAAGCTGGTGAAGATTATGGCGGCGGCCGTGATTTGGATGATTTTGTAGCTTTCATCAATGAGAAATGTGGCACCAACCGTGATGGGCAGGGGCAACTTACTTCTAAAGCTGGTATAGTAGCATCTCTGGATGACTTGGTGAAGGAGTTTGTGAGTGCTGACGATAATGAGAAGAAGGCAGTCTTTTCCAGGCTTGAGGAGGAAGTTAAGAAGCTTAAGGGTTCTGCTGCAAGATATGGCAACCTCTACTTAAAACTTGCTAAGAACAGTATGGAAAAGGGTACAGGCTATGCAAAGAATGAGATTCAACGTCTTGAGCGCATGCTTGAGAAGTCAATCAGCGCATCAAAGGCAGATGAATTCACACTCAAGAAGAACATCTTATTAACATTTGCTTGA 1044 0.4454 MALLFLSTVSADDVVVLTEDTFEKEVGKDRGALVEFYAPWCGHCKRLAPEYEKLGASFRKTKSVLIGKVDCDEHKSVCSKFGVSGYPTIQWFPKGSLEPKKYEGARTAEALVAFVNVEAGTNAKLASVPSSVVVLSSDNFDEVVLDETKDVLVEFYTPWCGHCQALAPTYEKVAAAFKLEEEVVIANVDADKYKDLAEKYGVSGYPTLKFFPKSNKAGEDYGGGRDLDDFVAFINEKCGTNRDGQGQLTSKAGIVASLDDLVKEFVSADDNEKKAVFSRLEEEVKKLKGSAARYGNLYLKLAKNSMEKGTGYAKNEIQRLERMLEKSISASKADEFTLKKNILLTFA* 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03913 347 FunFam Protein disulfide-isomerase A6 homolog 126 244 - -
Rops8g03913 347 NCBIfam protein disulfide-isomerase domain 136 237 IPR005788 GO:0003756
Rops8g03913 347 NCBIfam protein disulfide-isomerase domain 17 117 IPR005788 GO:0003756
Rops8g03913 347 Gene3D Glutaredoxin 124 252 - -
Rops8g03913 347 FunFam Protein disulfide-isomerase A6 homolog 7 125 - -
Rops8g03913 347 SUPERFAMILY Thioredoxin-like 5 116 IPR036249 -
Rops8g03913 347 CDD PDI_a_ERp38 13 115 - -
Rops8g03913 347 PANTHER PROTEIN DISULFIDE-ISOMERASE C17H9.14C-RELATED 14 333 - -
Rops8g03913 347 CDD ERp29c 255 346 IPR011679 GO:0005783
Rops8g03913 347 Pfam Thioredoxin 14 116 IPR013766 -
Rops8g03913 347 Pfam Thioredoxin 132 235 IPR013766 -
Rops8g03913 347 Gene3D - 253 347 IPR036356 -
Rops8g03913 347 CDD PDI_a_ERp38 138 234 - -
Rops8g03913 347 ProSiteProfiles Thioredoxin domain profile. 1 120 IPR013766 -
Rops8g03913 347 ProSitePatterns Thioredoxin family active site. 152 170 IPR017937 -
Rops8g03913 347 SUPERFAMILY Thioredoxin-like 129 240 IPR036249 -
Rops8g03913 347 PRINTS Thioredoxin family signature 40 49 - -
Rops8g03913 347 PRINTS Thioredoxin family signature 201 212 - -
Rops8g03913 347 PRINTS Thioredoxin family signature 32 40 - -
Rops8g03913 347 Gene3D Glutaredoxin 7 123 - -
Rops8g03913 347 ProSiteProfiles Thioredoxin domain profile. 122 239 IPR013766 -
Rops8g03913 347 SUPERFAMILY ERP29 C domain-like 252 346 IPR036356 -
Rops8g03913 347 Pfam Endoplasmic reticulum protein ERp29, C-terminal domain 253 346 IPR011679 GO:0005783
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g03913 Rops-Chr8 80160081 80164126 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03913 K09584 - gmx:100796355 605.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g03913 8 80160081 80164126 Rops8g03913 8 80160081 80164126 ECH