Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03896 ATGGCAGACTTGGAAAACATGCTTCTAGAGGCAGCTGGAAGGACCAGTTCTCCAGTGAGAAAGCGCCACAAACCTAAGAACTCAAGAATGAAACGTGAGGGTGCAGCATTCTCTGATGGTGGAAGTAATTCAAGAGAGGAAGATTCTGATGAGGGTGGTGGTGGTGGTGGTGGTGCAAACAAGAGGCCACCAAGATGTGCATCTCATGTTCCATTGAAGAAAAGGTTGGACCTCAGCAGAAGAAGTAGTAGTCTCAATAATGAACATGGTAGCCAGGGAGGAGGTGAGTTAGAGGATGGAGGTCCTACTAGGGAAGAAGATGGCAGCAGTGAAGAATCTGATGTTGGCAGTGATCTTTACAAGAATGAAGATGACAAGCAACGGCTAGCAAAGATGACTGAACTTGAAAGAGAGATGATTTTGTCAGATAGAGCAGCTAAGAAAGGTGAAAAGGAAATCAAAGAACAATTCAGGATGAAGAGGGACAAAAATAATGCAAATGCAAAGACTAGTACTCAATCATCTCTTCCACCATCTGCCAAGATTCGTTCATCAGCTAGAAATGCCGAGAGGACAGCTGCCAAGGGGGATGTTCTAAGTGAATTGCGCGCAAAAAGGATGAAGCAGCAGATCCCTGACACTCATGGTAAATTAGGCAATGCATCAGGAACAGGCTCAAGTAGCAAGGGAGTGAAGCAAAAATCTGGAATAACAACAAGTCCAAGTAGCTCCTCCTCCAGTCAGAGTGAGAGTGTTATGAGGTCTGACAGTGAAAGAGAATCCTCTGAGGATGGTGGATTGGCTGACAGTGATGATGATAACAACATGCATGAATCAGAGAAGCCAACATTTGGGGATATAAAGGAAATTACCATTAGGAGGTCAAAGCTTGTGAAATGGTTGAATGAACCATTTTTTGAGGAGCTAATGGTTGGTTGTTTTGTGAGAATTGGCATAGGAAGGTCAGACAGTGGACCTGTCTATAGGCTCTGCATGGTCCAGAGAGTTGATGGCAGTAACCCAAATAGACATTACAAGGTAGAGAATAGAGTCACTCATAAGTATCTGGTTTGTGTCTGGGGCAGTGAAAACTCTGCTGCCAGGTTTCAGGTGGCTGTGGTTTCAGATTCTGCACCATTGGAGAAAGAGTTCAGACAATTGGTTAGAGAAGTTGAGAGAACTTGCAGCCAGATGCCTAGTAAGATGAATGTATTGGAAAAGAAAGAGGCGATAAGAAGAACCAACTCATACGTTTACTCAGCAGCCACTGTGAAGCAGATGCTAGAGGAGAAAAGATCTGCCACATCTAGGCCACTGAACATTGCAGTAGAGAAGGATCGTTTGAAGAGGGAGTTGGAAATAGCAAAAAGTAAGAATGATGAGGCTGAGATGGATAGAATCTACACAAAGCTGGCTGAATTGGAAGCATCACGTCAAGCCAGGGAGAATGATGCCAAGGCTCTCAGGTTGGCTGAGATGAACAGAAAGAACAAGTTTGAGAACTTCAAAAACTTGTCTGAGCATAGACATACAAATGGACATTTAAAAGCTGGTGAGGAGGGGTATGATCCATTTTCTAGGAGGTGGACACGGTCGAGGAATTACTACAGCTCAGAGCAGGTAAAAGAAAGTAAAGAAGCTGAGGAGAATGAAGGTAAAGGAGAAAAGGATGAAACTAAGGATGAAGTTAGTAAGGGGCAAGAAGAAGAACCTGCCACAACAAAGGTTGGTGTTGAAGCCACAGAAGCAGCATTGCAAGCTGCTGCTGATGCAGGGAAGTTGATTGATACCGCTGCTCCTGTGGATCATGGAACAGAATCAAATACGCTGCATGATTTTGAATTGCCAATTTCATTGGCTCAACTTAAGAATTTTGGTGGACCACAGGGACTGAAAGATGCTTTTTTGGAAAGGAAACAAAAAATAGAAGCAACAGTTGGTTGCCGGGTCCCTGAGAACGATGGGAGTAGGCATGCTCTTACATTAACTATCAGTGACTACAAGAGAAGAAGAGGGCTACTTTGA 2025 0.4395 MADLENMLLEAAGRTSSPVRKRHKPKNSRMKREGAAFSDGGSNSREEDSDEGGGGGGGANKRPPRCASHVPLKKRLDLSRRSSSLNNEHGSQGGGELEDGGPTREEDGSSEESDVGSDLYKNEDDKQRLAKMTELEREMILSDRAAKKGEKEIKEQFRMKRDKNNANAKTSTQSSLPPSAKIRSSARNAERTAAKGDVLSELRAKRMKQQIPDTHGKLGNASGTGSSSKGVKQKSGITTSPSSSSSSQSESVMRSDSERESSEDGGLADSDDDNNMHESEKPTFGDIKEITIRRSKLVKWLNEPFFEELMVGCFVRIGIGRSDSGPVYRLCMVQRVDGSNPNRHYKVENRVTHKYLVCVWGSENSAARFQVAVVSDSAPLEKEFRQLVREVERTCSQMPSKMNVLEKKEAIRRTNSYVYSAATVKQMLEEKRSATSRPLNIAVEKDRLKRELEIAKSKNDEAEMDRIYTKLAELEASRQARENDAKALRLAEMNRKNKFENFKNLSEHRHTNGHLKAGEEGYDPFSRRWTRSRNYYSSEQVKESKEAEENEGKGEKDETKDEVSKGQEEEPATTKVGVEATEAALQAAADAGKLIDTAAPVDHGTESNTLHDFELPISLAQLKNFGGPQGLKDAFLERKQKIEATVGCRVPENDGSRHALTLTISDYKRRRGLL* 675
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03896 674 ProSiteProfiles Plus3 domain profile. 281 416 IPR004343 GO:0003677
Rops8g03896 674 Pfam Plus-3 domain 286 391 IPR004343 GO:0003677
Rops8g03896 674 Coils Coil 471 491 - -
Rops8g03896 674 MobiDBLite consensus disorder prediction 501 577 - -
Rops8g03896 674 MobiDBLite consensus disorder prediction 1 283 - -
Rops8g03896 674 MobiDBLite consensus disorder prediction 99 165 - -
Rops8g03896 674 MobiDBLite consensus disorder prediction 215 252 - -
Rops8g03896 674 PANTHER UNCHARACTERIZED 126 673 - -
Rops8g03896 674 FunFam RNA polymerase-associated protein RTF1 282 414 - -
Rops8g03896 674 Coils Coil 445 465 - -
Rops8g03896 674 MobiDBLite consensus disorder prediction 166 186 - -
Rops8g03896 674 MobiDBLite consensus disorder prediction 538 569 - -
Rops8g03896 674 SMART rtf1 281 393 IPR004343 GO:0003677
Rops8g03896 674 SUPERFAMILY Plus3-like 283 413 IPR036128 GO:0003677
Rops8g03896 674 Gene3D - 282 414 IPR036128 GO:0003677
Rops8g03896 674 MobiDBLite consensus disorder prediction 188 212 - -
Rops8g03896 674 MobiDBLite consensus disorder prediction 501 527 - -
Rops8g03896 674 MobiDBLite consensus disorder prediction 253 283 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g03896 Rops-Chr8 79890025 79892049 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03896 K15178 - gmx:100793188 827.009