Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03894 ATGGCCAATACAATTGCAATGCTGGGTTTTCTACCCCGACCCATTACCCAGATGACGTCGTTTCAGCTACCCAATCACAGTTACTCCTTCCATTCCCCTCGTTGCTCCGTTTCCCCCACATCTCAATCGACTAAAGCTTTTGCAGTTCCAAGGAGGAAAGCAATGTCTTTGATCTTATCGAGTTACATTGTCTCAGAGGTTGGTTTAGCATTGGCTCAACAGTCTACTGTGTCCCGTGAATATGTAGACACATTTGATGGGTATTCATTCAAGTACCCAGGGAATTGGATTCAAGTTAGAGGTGCTGGGGCTGACATATTCTTCAGGGACCCTTATGTTCTTGATGAAAATCTATCTGTTGAAGTTTCTTCACCTTCCTCTTCCAGATACAAGAGTGTTGAAGACTTGGGTCCACCCCAAGAAGCTGGAAAGAAAGTGCTCAAGCAGTATCTCACTGAGTTTATGTCTACAAGGCTTGGTGTTAGACGTGAATCAAATATTCTTTCCACATCTTCAAGGGTAGCTGATGATGGCAAGTTATACTATCAAGTTGAGGTAAACATAAAGTCATATGCTAATAACAATGAGCTTGCTGTGATGCCACAAGACCGGGTGGTACGTCTGGAATGGGATAGGAGGTACCTATCTGTTCTAGGAGTTGAAAACAACCAATTGTATGAGTTGAGATTGCAGGCCCCAGAAAATGTGTTCTCAGAGGAGGAGAATGATCTTCGTCAAGTCATGGACTCGTTTCGAGTGAACAAGATTGTTCGTTAG 777 0.435 MANTIAMLGFLPRPITQMTSFQLPNHSYSFHSPRCSVSPTSQSTKAFAVPRRKAMSLILSSYIVSEVGLALAQQSTVSREYVDTFDGYSFKYPGNWIQVRGAGADIFFRDPYVLDENLSVEVSSPSSSRYKSVEDLGPPQEAGKKVLKQYLTEFMSTRLGVRRESNILSTSSRVADDGKLYYQVEVNIKSYANNNELAVMPQDRVVRLEWDRRYLSVLGVENNQLYELRLQAPENVFSEEENDLRQVMDSFRVNKIVR* 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03894 258 Gene3D Mog1/PsbP, alpha/beta/alpha sandwich 72 253 - -
Rops8g03894 258 PANTHER - 26 253 - -
Rops8g03894 258 SUPERFAMILY Mog1p/PsbP-like 80 253 IPR016123 -
Rops8g03894 258 Pfam PsbP 79 253 IPR002683 GO:0005509|GO:0009523|GO:0009654|GO:0015979|GO:0019898
Rops8g03894 258 NCBIfam photosystem II reaction center PsbP 54 253 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03894 - - gmx:100792664 431.795
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g03894 8 79882623 79884101 Rops8g03894 8 79882623 79884101 ECH