Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03886 ATGTCACTGTCTTTCTCTTCAACTTCCTCGGTGGCTTTCTCAGAATCTTCATTCGTGTTCGCGAGACCAAAACATCTTTGTTCTAATGGTGGTGGTGGTCGTCTTGTAGTGAATGTTGGAGGTTCCAGCTTCTGTAGAAGATTCAAACTTTGGATACTCGCGAGGCTCAATTTCCAACCTAAGAGTAAAAATCGCTTCAAGAATAATCTGGAAACAGGTTTTTCAAATGAAAAGGGACCGCTTTCTGAATCGTCTTCAATTCTTCGTGTTTCTGATGGTTCCTCCAGAAGTCAAATGGATGATGAAAGTAGAGCACCCTCACTTTGCATTGCTGTCATAGGAGCCACTGGTGAGTTGGCAAGGAGGAAGATTTTTCCAGCTTTATTTGCCCTCTACTACAGTGGTTTTCTTCCTCAGAATGTAGGCATTTTTGGGTATTCAAGGAAGAATATAACTGACGAAGACCTGCGATCCATTATAGCTTCAACTTTAACATGCCGAGTTGATCATCAACAGGATTGTGGGGACAAAATACATGCTTTCCTTGATAGAACATACCATGTTAATGGAGGCTACGACAACAAAGATGGGATGTCCAAGCTGAACGCCAGAATGGAGCAACTCGAGGGAAGATCCAAAACCAACAGGATATTCTACCTGTCTGTGCCCCAAGAAGCACTTTTGGATGTTGCATCATGTCTTTCAAGCAGTGCTCAGACCCAAAAGGGATGGAATCGTGTAATTATTGAGAAGCCATTCGGCCTTGATTCAGTCTCTTCCCACAGGCTGACACAATATCTTCTTTCAAAGTTTGAGGAAAAGCAAATATATAGGATTGACCATCTTCTAGGAAGGAATCTCATGGAAAATCTCACAGTTTTAAGGTTTTCAAATCTGGTTTTTGAGCCACTGTGGAGTCGTACTTACATACATAATGTACAGGTTATTTTATCAGAGGACTTGACTGTGCATCCAGGAAGGTATTTTGGTGGCTATGGGATTATCCGTGATATTGTTCACAGTCATGTGCTCCAAACAATTGCATTGCTTGCCATGGAACCACCAATTAGCCTTGATGGAGAAGATATTCGAAACGAAAAGGTCAAGGTTCTGAGATCAATTCGCAAATTAGAGCCTAAGGATGTCATTCTTGGCCAGTATAAAGCAAGTAGCAGAGACAAGTTCGATGTGTGCTTAAATGGTCTGACACCTACTTATTTCGCTGCTGCACTATACATTGACAATGCACGATGGGATGGTGTGCCATTTTTGGTTAAAACAGGCTTGGGACTCATCAAACACCAAACGGAGATTCGGATTCAATTTCGCCATGTTCCAGGAAATGTTTACCACGAATACGTCGGGCATAATATGGACCGTGCCACAAATGAGCTCATTCTTCGTGATGTTCCTGATGAAGCTATTCTGGTGAGAGTAAACAACAAGGTTCCAGGACTAGGATTACAACTAGACTCTTCAGAATTAAATTTGCTTTACAAGGACAAGTACAACATGGAGGTGCCTGATTCATATGAGCATCTTCTGCTTGATGTCATTGATGGGGATAACCATCTGTTTATGAGAAGTGATGAGCTGGCAGCTGCATGGAACATTCTAACTCCAATTCTGAATGAGATAGACAAGGACAATATATCAGTGGAGCTTTATGAGTTGGGGGGTCGTGGTCCAGTTGGGGCATACTACCTCTGGGCAAAACATGGTGTCCGTTGGGTAGAGGACTAG 1743 0.4251 MSLSFSSTSSVAFSESSFVFARPKHLCSNGGGGRLVVNVGGSSFCRRFKLWILARLNFQPKSKNRFKNNLETGFSNEKGPLSESSSILRVSDGSSRSQMDDESRAPSLCIAVIGATGELARRKIFPALFALYYSGFLPQNVGIFGYSRKNITDEDLRSIIASTLTCRVDHQQDCGDKIHAFLDRTYHVNGGYDNKDGMSKLNARMEQLEGRSKTNRIFYLSVPQEALLDVASCLSSSAQTQKGWNRVIIEKPFGLDSVSSHRLTQYLLSKFEEKQIYRIDHLLGRNLMENLTVLRFSNLVFEPLWSRTYIHNVQVILSEDLTVHPGRYFGGYGIIRDIVHSHVLQTIALLAMEPPISLDGEDIRNEKVKVLRSIRKLEPKDVILGQYKASSRDKFDVCLNGLTPTYFAAALYIDNARWDGVPFLVKTGLGLIKHQTEIRIQFRHVPGNVYHEYVGHNMDRATNELILRDVPDEAILVRVNNKVPGLGLQLDSSELNLLYKDKYNMEVPDSYEHLLLDVIDGDNHLFMRSDELAAAWNILTPILNEIDKDNISVELYELGGRGPVGAYYLWAKHGVRWVED* 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03886 580 Pfam Glucose-6-phosphate dehydrogenase, NAD binding domain 112 290 IPR022674 GO:0006006|GO:0016614|GO:0050661
Rops8g03886 580 PRINTS Glucose-6-phosphate dehydrogenase signature 246 259 IPR001282 GO:0006006|GO:0016614|GO:0050661
Rops8g03886 580 PRINTS Glucose-6-phosphate dehydrogenase signature 339 355 IPR001282 GO:0006006|GO:0016614|GO:0050661
Rops8g03886 580 PRINTS Glucose-6-phosphate dehydrogenase signature 417 443 IPR001282 GO:0006006|GO:0016614|GO:0050661
Rops8g03886 580 PRINTS Glucose-6-phosphate dehydrogenase signature 321 338 IPR001282 GO:0006006|GO:0016614|GO:0050661
Rops8g03886 580 PRINTS Glucose-6-phosphate dehydrogenase signature 270 298 IPR001282 GO:0006006|GO:0016614|GO:0050661
Rops8g03886 580 Pfam Glucose-6-phosphate dehydrogenase, C-terminal domain 293 577 IPR022675 GO:0004345|GO:0006006|GO:0050661
Rops8g03886 580 Gene3D - 105 278 - -
Rops8g03886 580 Hamap Glucose-6-phosphate 1-dehydrogenase [zwf]. 107 579 IPR001282 GO:0006006|GO:0016614|GO:0050661
Rops8g03886 580 Gene3D Dihydrodipicolinate Reductase; domain 2 279 579 - -
Rops8g03886 580 NCBIfam glucose-6-phosphate dehydrogenase 108 578 IPR001282 GO:0006006|GO:0016614|GO:0050661
Rops8g03886 580 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 101 293 IPR036291 -
Rops8g03886 580 FunFam Glucose-6-phosphate 1-dehydrogenase 279 578 - -
Rops8g03886 580 PANTHER GLUCOSE-6-PHOSPHATE 1-DEHYDROGENASE G6PD 98 577 IPR001282 GO:0006006|GO:0016614|GO:0050661
Rops8g03886 580 SUPERFAMILY Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 280 578 - -
Rops8g03886 580 PIRSF G6PD 91 580 IPR001282 GO:0006006|GO:0016614|GO:0050661
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g03886 Rops-Chr8 79812748 79818032 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03886 K00036 - gmx:100796541 959.518
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g03886 8 79812748 79818032 Rops8g03886 8 79812748 79818032 ECH