Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03871 ATGGCTTCCGACAACAATCATCACATCCACGACAACACAAACGGCTGTTCCCACATACCCAAAAAGCCAAAACTTATGCTAATTTCCTCATCGGAGATTGAATCGGAGTTCTCCCATCACGACCCCTCCGTCGCCCGTATCAACAACGGCAGCTTCGGTTGCTGCCCTTCCTCCGTCATCGCCGCCCAACAAGAGTGGCAACTCAAGTATCTCCGACAACCCGACCACTTCTACTTCAACAACCTCAAAACAGGGATCCTTAAATCACGAACCATCATCAAGGAATTGGTCAACGCCGAACATGTTGATGAGATCTCCATCGTCGATAACGCCACCACCGCCGCCTCCATCGTCCTCCAACACACCGCTTGGTCCTTCCGTGAAGGAAGGTTCCAGAAAGGTGATGTCGTCATCATGCTCCATTATGCTTACGGCGCCGTTAAAAAATCCATGGAGGCTTACGTCACACGTGCCGGAGGAAAAGTCATCGAAGTCCCCCTCCCTTTTCCGGTGAGTTCCAATGATGACATAATTCGTGAATTCAGAAAAACTTTGGAGAAAGGAAAGGAAGATGGCAAAAGGGTTAGGCTCGCTGTCATTGATCATGTTACTTCCATGCCTTGTGTTGTGATTCCGGTGAAGGAATTGATTCAAATTTGCAGAGAAGAAGGGGTTGACCAAGTTTTTGTTGATGCTGCTCATGCTATTGGGTGTACTGATGTTGACATGAAAGAGATTGGTGCTGATTTTTACACTAGCAATTTGCATAAATGGTTCTTTTGTCCACCTTCTGTTGCATTTTTGTATACTCGAAAGCATCCTAATTCTAAGTGTAGTAGTGATTTGCATCATCCTGTGGTGTCTCATGAGTATGGTAATGGGTTGGCAGTGGAAAGTGCTTGGATTGGGACTAGGGACTATAGTTCCCAGTTGGTGGTTCCTGAGGTTTTGGACTTTGTTAATAGATTTGAAGGAGGTATTGAAGGGATCAAGAAGAGGAATCATGAAGCTGTTGTGGAGATGGGAGAGATGTTGGCTAAAGCTTGGGGAACTCATCTTGGGTGTCCTCCACATATGTGTGCTAGCCTGGTTATGGTGGGTTTGCCTCCTTGTTTGGGGATTAGTAGTGATTCTGATGCTCTCAAGTTAAGGACACATTTGAGGGATGATTTTGGAGTTGAAGTTCCAATATATTATAGACCACCAAGAGATGGGGAAGTTGGGCCGGTAACTGGATATGCAAGAATTTCTCATCAAGTTTACAATAAAGTTGATGACTATCACAAGTTTAGGGATGCAGTTAACAAACTTGTAAACACTCGGTTTACTTGTACTCTCCTCTCGGATTGA 1350 0.4519 MASDNNHHIHDNTNGCSHIPKKPKLMLISSSEIESEFSHHDPSVARINNGSFGCCPSSVIAAQQEWQLKYLRQPDHFYFNNLKTGILKSRTIIKELVNAEHVDEISIVDNATTAASIVLQHTAWSFREGRFQKGDVVIMLHYAYGAVKKSMEAYVTRAGGKVIEVPLPFPVSSNDDIIREFRKTLEKGKEDGKRVRLAVIDHVTSMPCVVIPVKELIQICREEGVDQVFVDAAHAIGCTDVDMKEIGADFYTSNLHKWFFCPPSVAFLYTRKHPNSKCSSDLHHPVVSHEYGNGLAVESAWIGTRDYSSQLVVPEVLDFVNRFEGGIEGIKKRNHEAVVEMGEMLAKAWGTHLGCPPHMCASLVMVGLPPCLGISSDSDALKLRTHLRDDFGVEVPIYYRPPRDGEVGPVTGYARISHQVYNKVDDYHKFRDAVNKLVNTRFTCTLLSD* 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03871 449 MobiDBLite consensus disorder prediction 1 21 - -
Rops8g03871 449 Pfam Aminotransferase class-V 56 355 IPR000192 -
Rops8g03871 449 SUPERFAMILY PLP-dependent transferases 38 438 IPR015424 -
Rops8g03871 449 PANTHER L-CYSTEINE DESULFHYDRASE 31 445 - -
Rops8g03871 449 Gene3D - 56 322 IPR015421 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g03871 Rops-Chr8 79633997 79636757 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03871 K22207 - gmx:100786129 765.377
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g03871 8 79633997 79636757 Rops8g03871 8 79633997 79636757 ECH