Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03848 ATGCTGCGGTTGAAAGCGTTCCGGCCTACAAGTGACAAAATCGTTAAGATCCAATTGCATCCTACGCATCCATGGATGGTGACAGCTGATGATTCAGATCGAGTCTCTGTTTGGAACTGGGAACACCGCCAAGTAATTTATGAGTTGAAAGCTGGTGGAGTGGATGAGCGACGTTTGGTCGGTGCTAAGTTGGAGAAGCTGGCTGAGGGAGAAACAGATTCCAAAGGGAAACCCACGGAAGCCATTCGTGGAGGAAGTGTTAAGCAGGTGAATTTTTATGATGATGATGTGCGCTTTTGGCAACTTTGGCATAATCGTTCTGCAGCTGCAGAGGCTCCAACAGCTGTTCATACTTCAGCTTTTAGTTCTCCTGCCCCAACAACAAAAGGGAGGCATTTTCTTGTCATATGTTGTTTAAATAAAGCTATATTTTTGGACTTGGTGACGATGCGTGGCCGTGATGTTCCAAAGCAAGAGCTTGATAACAAGTCCCTTCATTGCATGGAGTTCCTTTATAGACCCGGCGTTGGTGATGGTCCTCTTGTTGCTTTTGGTTCATCTGATGGAGTCATTAGAGTTCTCTCAATGATGACATGGAAGCTTGTGCGAAGGTACACTGGAGGTCACAAAGGATCAATTTCTTGCTTGATGTCCTTCATGGCTGCTTCTGGTGAGGCTCTTCTGGTTTCGGGTGCTAGTGATGGATTGCTCATACTATGGAGTGCTGATCACGGACAAGATTCACGTGAACTTGTACCAAAGCTGAGTTTAAAGGCACATGATGGCGGGGTTGTGGCAGTTGAGCTGTCTAGGGTGATGGGAGGTGCTCCTCAGCTAATTACAATTGGTGCAGATAAGACATTAGCTATATGGGACACAATCTCCTTTAAGGAGCTGCGGCGTATAAAGCCAGTTCCAAAATTGGCTTGCCACAGTGTGGCTTCTTGGTGCCATCCTCGAGCTCCAAACCTTGATATTCTAACCTGTGTCAAAGATTCTCACATTTGGGCAATTGAACATCCCACATATTCTGCTCTCACAAGGCCATTGTGCGAATTGACCTCAGTTATTCCTCCACAAGCTCTTGCTCCTAGTAAGAAACTGAGGGTGTATTGTATGGTTGCACACACTTTGCAGCCGCATCTTGTTGCTACTGGAACCAATATTGGTGTTATTATCTGCGAGTTTGATGCTAGATCTCTTCCACCTGTAGCTCCCCTACCGACCCCATCAGATAGTAGAGAGCATTCTGCCATATTTGTAATTGAAAGGGAACTAAAGCTATTAAATTTTCAGTTAAACAACTCGGCAAATCCATCTCTTGGAAATAACAGCTCCTTGTCAGAAACAGGAAGACCCAGGGGAGATTTTTTTGATCCATTACCCGTCAAGCAGGGGAAGAAGCACATTAGTACACCTGTTCCGCATGATTCACACTCAGTTCTTTCTGTGAGCAGTTCAGGAAAGTATCTAGCAATCGTTTGGCCGGATATTCCTTATTTCTCTGTCTACAAGGTTAGTGATTGGTCAATTGTCGACTCTGGCAGTGCAAGACTTCTTGCTTGGGATACTTGTCGTGACAGATTTGCTATCTTGGAATCAGCATTACCTCCTAGAATTCCTATAATTCCCAAGGGTAGTTCATCAAAAAGAGCAAAAGAAGCTGCTGCAGCACAAGCAGCTGCAGCAGCAGCTGCTGCTGGTTCCTCGGCTTCTGTTCAAGTCCGTATCTTGTTAGATGATGGAACATCAAATATACTGATGAGGTCTGTTGGTGCACAACGCAGTGAACCAGTCATTGGTTTGCATGGAGGGGCACTTCTTGGTGTTGCTTATCGAACATCTAGGAGAATCAGTCCTATTGCTGCTACGGCTATTTCAACAATCCAGTCTATGCCCTTATCAGGTTATGGAAGCAGTGGTCTTTCTTCTTTTTCTACTTATGATGATGGATTTTCTTCACATAAATCTCCAGCTGAGGCGGCACCTCAAAACTTCCAGCTATACAGTTGGGAGACATTCCAGCCCGTGGGCGGTCTGCTTCCTCAGCCAGAATGGACTGCTTGGGACCAGACTGTTGAGTACTGTGCATTTGCATACCAACAATACATAGTCATATCTTGTTTGCGCCCACAATATAGATACCTGGGAGATGTTGCAATTCCATATGCTACTAGTGCTGTTTGGCACCGGAGGCAACTGTTTGTGGTTACACCAACTACTATAGAAATTGTTTTTGTGGACGCTGGGGTTGCACAAATTGACATTGAGACTATGAAGATGAAAGAAGAGCAGAAAATGAAAGAAACACAGGCAAGAGCAGTCGCAGAGCATGGAGAGTTGGCACTAATTACAGTAGAAAGTTCCCAATCTACTCCAGAAGAAAGAATATCATTGAGGCCACCAATGCTGCAGGTGGTTCGATTGGCTTCTTTTCAGCATGCTCCGTCAGTGCCACCTTTCTTAACATTACCAAAACAATCTAGAATTGGTGATGATGACTCTTGGATGGCAAAAGAAGCAGAAGAGAGAAAGGCAAGTGAGGTGGCTGTTGGTGGTGGGGGTGTGTCTGTGGCAGTTACTCGTTTTCCAACAGAGCAGAAACGTCCAGTTGGGCCTCTCGTTGTAGTAGGTGTTAGAGATGGAGTTCTTTGGCTAATTGATAGGTACATGCATGCTCATGCCTTATCCTTGAGTCATCCTGGCATTCGTTGCCGATGTCTTGCTGCTTATGGTGATGCTGTTAGTGCAGTAAAATGGGCAAGTAGGCTTGGGAGAGAGCACCATGATGATTTAGCACAATTTATGCTAGGAATGGGCTATGCTACTGAAGCACTTCATTTGCCTGGAATATCTAAGAGGTTGGAGTTTGATTTGGCAATGAAGAGCAATGATTTGAAGAGAGCTCTTCAGTGTCTTCTTACCATGAGTAACAGCAGGGATATAGGACATGATGGTTCAGGGCTTGGTTTGAATGACATTCTTAATTTAACAGATAAAAAACAAGAGATAAAACAAGATATAGTTGAAGGTGTTCAGGGTATAGTGAAGTTCGCAAAAGAGTTCTTGGATCTTATTGACGCTGCAGATGCAACAGCACAGGGTGAAATTGCCCGTGAAGCTCTCAAGAGGTTAGCTGCAGCTGGGTCTGTGAAAGGTGCTTTACAAGGTCATGAGTTGAGGGGTTTGGCATTGCGCCTTGCAAATCATGGAGAGTTGACTCGGCTAAGTGGTTTGATAAACAACTTAATCACGCTTGGCTTGGGACGGGAAGCTGCATTTGCTGCTGCTGTTTTGGGTGACAATGCTCTAATGGAGAAAGCATGGCAGGATACTGGAATGCTGGCAGAGGCTGTGCTTCATGCTCATGCACACGGACGCCCAACTTTGAAGAACTTAGTTCAGGCTTGGAACCAAATGCTGCAGAGAGAGATTGAACCTACTCCATCACAGAAGACAGATGCTACAGCTGCATTTCTAGCTTCTCTTGAGGAGCCTAAGCTTACGAGCTTGGCAGAAGCAGGGAAGAAACCGCCTATCGAAATCCTACCTCCGGGGATGATGTCTCTTAATGCCCCTATCTCTATCCAGAAAAAACCAGGTTCTGCTGCTCAGAATTCCCAACCACCATCAGAGAAGCCGTTGGCACTGGAAGCACCTCCTACTACCACAGCAGCAACAGAGAGTGCTACACAGCAGCCTGAATCTGCACCTGCACCAGTTAGTGACGCCTCTCCGTCAGAGTCTACCACAGACCCTACAACAGTTCGAGAGGCTGCTCCACCTCAACCAGAATCAGGTGAAACCACTGGAGATAATGAAGGTCCTACCTCTGCGTCAGTAAGTGACGAAAATCCAAATGTTAATGGGGAAACTGTTCAACAAGAGTCTACGAGCAATCCAGCACCAACGGAGGACCCATCACCTGTAGCAGAGGTGTCGGAAACTAATGTTCCAAGTCCGACAACAGTACCTGTGAGTGACCCCCTCATATGA 3996 0.4587 MLRLKAFRPTSDKIVKIQLHPTHPWMVTADDSDRVSVWNWEHRQVIYELKAGGVDERRLVGAKLEKLAEGETDSKGKPTEAIRGGSVKQVNFYDDDVRFWQLWHNRSAAAEAPTAVHTSAFSSPAPTTKGRHFLVICCLNKAIFLDLVTMRGRDVPKQELDNKSLHCMEFLYRPGVGDGPLVAFGSSDGVIRVLSMMTWKLVRRYTGGHKGSISCLMSFMAASGEALLVSGASDGLLILWSADHGQDSRELVPKLSLKAHDGGVVAVELSRVMGGAPQLITIGADKTLAIWDTISFKELRRIKPVPKLACHSVASWCHPRAPNLDILTCVKDSHIWAIEHPTYSALTRPLCELTSVIPPQALAPSKKLRVYCMVAHTLQPHLVATGTNIGVIICEFDARSLPPVAPLPTPSDSREHSAIFVIERELKLLNFQLNNSANPSLGNNSSLSETGRPRGDFFDPLPVKQGKKHISTPVPHDSHSVLSVSSSGKYLAIVWPDIPYFSVYKVSDWSIVDSGSARLLAWDTCRDRFAILESALPPRIPIIPKGSSSKRAKEAAAAQAAAAAAAAGSSASVQVRILLDDGTSNILMRSVGAQRSEPVIGLHGGALLGVAYRTSRRISPIAATAISTIQSMPLSGYGSSGLSSFSTYDDGFSSHKSPAEAAPQNFQLYSWETFQPVGGLLPQPEWTAWDQTVEYCAFAYQQYIVISCLRPQYRYLGDVAIPYATSAVWHRRQLFVVTPTTIEIVFVDAGVAQIDIETMKMKEEQKMKETQARAVAEHGELALITVESSQSTPEERISLRPPMLQVVRLASFQHAPSVPPFLTLPKQSRIGDDDSWMAKEAEERKASEVAVGGGGVSVAVTRFPTEQKRPVGPLVVVGVRDGVLWLIDRYMHAHALSLSHPGIRCRCLAAYGDAVSAVKWASRLGREHHDDLAQFMLGMGYATEALHLPGISKRLEFDLAMKSNDLKRALQCLLTMSNSRDIGHDGSGLGLNDILNLTDKKQEIKQDIVEGVQGIVKFAKEFLDLIDAADATAQGEIAREALKRLAAAGSVKGALQGHELRGLALRLANHGELTRLSGLINNLITLGLGREAAFAAAVLGDNALMEKAWQDTGMLAEAVLHAHAHGRPTLKNLVQAWNQMLQREIEPTPSQKTDATAAFLASLEEPKLTSLAEAGKKPPIEILPPGMMSLNAPISIQKKPGSAAQNSQPPSEKPLALEAPPTTTAATESATQQPESAPAPVSDASPSESTTDPTTVREAAPPQPESGETTGDNEGPTSASVSDENPNVNGETVQQESTSNPAPTEDPSPVAEVSETNVPSPTTVPVSDPLI* 1332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03848 1331 Gene3D - 906 1158 - -
Rops8g03848 1331 PANTHER TSET COMPLEX MEMBER TSTF 1 1255 - -
Rops8g03848 1331 SMART WD40_4 198 241 IPR001680 GO:0005515
Rops8g03848 1331 SMART WD40_4 250 292 IPR001680 GO:0005515
Rops8g03848 1331 SMART WD40_4 1 39 IPR001680 GO:0005515
Rops8g03848 1331 MobiDBLite consensus disorder prediction 1222 1257 - -
Rops8g03848 1331 MobiDBLite consensus disorder prediction 1266 1324 - -
Rops8g03848 1331 Gene3D - 3 400 IPR015943 GO:0005515
Rops8g03848 1331 SUPERFAMILY WD40 repeat-like 7 407 IPR036322 GO:0005515
Rops8g03848 1331 MobiDBLite consensus disorder prediction 1191 1331 - -
Rops8g03848 1331 MobiDBLite consensus disorder prediction 1195 1212 - -
Rops8g03848 1331 ProSiteProfiles Trp-Asp (WD) repeats profile. 257 301 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g03848 Rops-Chr8 79292871 79310291 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03848 - - gmx:100786844 2257.64