Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03846 ATGTCGACGATAGCGAAGGAGCCAGAACAAGTGATGAGGATGAGAGGAGGTTCAGTGCTTGGAAAAAAGACGATTCTGAAGAGCGACCATTTCCCTGGTTGTCAGAATAAGCGTTTATCTCCTCAGATCGAAGGTGCTCCAAATTATCGTCAGGCTGAGTCATTACATGTTCATGGTGTTGCAATCCCAACCATTGATGGAATCCGAAATGTTCTCAACCACATTGGTGGCAAGACAGCACAAGTTCTTTGGATTAGCCTCCGTGAGGAACCGCTTGCGTACATTAATGGCCGCCCTTTTGTTTTACGTGATGTGGAGAAACCATTCTCCAACCTTGAGTATACGGGAATAAACAGGGAAAGGGTTGAACAAATGGAAGCTCGTTTGAAAGAAGATATCCTGATGGAAGCTGAAAGATATGGAAATAAGATCCTTGTGACCGATGAACTGCCAGATGGTCAGATGGTGGACCAGTGGGAACCGGTGTCATGTAATTCTGTGAAGACACCACTAGAGGTGTATGAGGAATTGCACGTGGAGGGATACCTTGTTGATTATGAACGTGTTCCCATAACTGATGAAAAATCGCCAAAGGAACTGGATTTTGATATTTTGGTTCATAAAATTTCTCAAGCTGATGTAAATACAGAGATAATTTTTAATTGTCAAATGGGGCGTGGACGAACTACAACTGGAATGGTCATTGCAACTTTGGTCTACCTCAATCGAATTGGGGCCTCTGGGTTTCCAAGAAGCAATTCAATTGGTAGAATTTCTCAATGTATGGATAATGTTGCTGACCATTTGCCTAACTCAGAGGAGGCAATTCGCAGGGGAGAATATGCAGTCATAAGAAGCTTGGTTCGGGTGTTAGAGGGTGGTGTTGAGGGGAAAAGACAAGTGGACAAAGTCATCGACAAATGTGCAGCAATGCAGAATCTGCGAGAAGCAATTGCTACCTATCGCAATAGCATTCTGCGACAACCAGATGAGATGAAAAGGGAGGCATCACTTTCCTTTTTTGTGGAGTACTTGGAGAGATACTACTTTTTAATATGTTTTGCTGTGTACATTCATTCAGAATGGGCTGCACTCTGTTCTAGTACTGCTGGTCACAATAGTTTTGCTGACTGGATGAGAGCAAGGCCTGAACTCTACAGCATTATTCGCAGGTTGCTCAGGAGAGATCCAATGGGTGCTCTTGGATATTCAAGTTTGAAACCATTTCTAAAGCAGATGGCCGAATCTACTGGTGACTGCCCTTCTGATATGGGTATGGTTGCTGCCTTGAGAAATGGCGAGGTTCTTGGCAGTCAAACTGTTCTAAAAAGTGATCACTGTCCTGGATGTCAAAACCCAAGTTTACCTGAGAGAGTGGATGGTGCTCCTAATTTCCGAGAAATTCCCGGATTTCCAGTTTTTGGTGTGGCAAATCCAACCATTGATGGTATCCGGTCTGTCATTTATAGGATTAGTAGCTCTAAAGGTGGATGCCCAATACTTTGGCATAATATGAGAGAAGAGCCTGTTATTTACATCAATGGGAAGCCATTTGTTCTTCGTGAAGCTGAAAGACCATACAAAAACATGATGGAGTACACGGGTATTGACTGTGAAAGAGTGGAGAAAATGGAAGCTCGATTAAAAGAAGATATTTTACGGGAAGCTAAACACTATGGCAGTAACATAATGGTTATTCATGAAACAGATGATGGCCAAATATTTGATGCTTGGGAGCATGTTACCCCTGACGTGATTCAAACCCCACTTGAAGTTTTCAAAAGCCTGGAAGCTGATGGGTTTCCCATTAAGTATGCACGTGTACCCATCACCGATGGAAAAGCTCCTGAAAATTCTGACTTTGATGCTTTGGCAATTAATATTACTTCTGCTGCAAAGGACACTGCTTTTGTTTTCAATTGTCAGATGGGTAGGGGCAGGACTACCACAGGTACTGTCATAGCTTGCCTTGTGAAACTTCGCATGGATTTTGGTAGGCCCATTAAAATACTGAGTGATGATGTGACCCATGAAGAATCAAATGGAAGTTCTTCAATTGGAGATAAAGCTGGGGGTTATGTCTCTGCATTAACCTCCAATACTTCGCAAATAAAGATAGAACAGAAACAGAATCGTGTTTTTGGTATAAATGACATCCTCTTGTTATGGAAGATAACGACATTATTTGACAATGGTGTTGAATGCCGAGAGGCCTTAGATGCTGTTATTGATAGATGTTCCGAACTTCAAAACATTCGTCAAGCTGTCCTACAATATAGGAAAGTATTCAATCAACAGCATGTCGAGCCTAGGGTAAGGAGGGTGGCATTAAATCGTGGTGCTGAATACTTGGAACGGTACTTCCGTTTAATTGCTTTTGCAGCATATCTTGGAAGCGAAGCATTTGATGGATTTTGTGGACAAGGAGAATGCAAAATGACATTTAAGGATTGGTTACATCAGAGGCCAGAGGTGAAGGCTATGAAACGGAGCATCAGACTAAGACCAGGGCAATTTTTCACTGTCTCGGAAGAGTTGAGAGAACCACTGGAGTCTCAGCATGGAGATGCAGTGATGGAGGCCATTGTCAAGGCCAGAAACGGTTCTGTTTTGGGGAAAGGCTCCATACTTAAAATGTATTTCTTTCCTGGTCAGAGAACTTCCAGTCATATACAAATACATGGTGCACCTCATGTTTTCAAGGTTGATGAATACCCTGTGTATTGCATGGCAACTCCAACCATCTCTGGTGCTAAGGAGATGCTAGACTATTTGGACGCGAAGTCTAAACCTTCCTTCACTGCCCAAAAAGTTATTATGACTGATCTGAGAGAAGAAGCAATTGTGTATATCAATTGTGTTCCCTTTGTCCTGAGGGAGTTAAACAAACCAGTTGATACACTCAAGCACGTGGGAATCACGGGTCCTGTGGTGCAACACATGGAAGCGCGGCTAAAAGAAGATATACTCGCTGAGATTAGACAGTTTGGTGCGCGAATGCTATTACACCGTGAGGAATATAACCCTTCAACAGATCAATCTGACGTTGTTGGATACTGGGAAAACATTAGGGCAGATGATATAAAGACACCAGCGGAAGTTTATTCTGCTCTGAAAGATGATGGATATGATATTGTCTATCGGAGGATACCCTTAACAAGAGAGAGATATGCTTTGGCCTCAGACGTTGATGCAATACAGTACTGTCAAGATGACTCTGCAAGGAGTTACCTTTTTATCTCGCACACAGGTTTTGGTGGAGTCGCTTATGCAATGGCCATCATCTGTATTAGACTTGGTGCAGAGGCAAACTTTGCATCTGAAGTCCCACCGCCATCATTTGGTCCTCATGTAGATGCAGTGACTGAAGAGAACTTGCCCTCTCGGGCTCCTAATGAAACCGCACTTAGGATGGGTGACTATCGTGACATTTTGAACCTTACAAGAGTCCTCGTACATGGTCCCCAAAGCAAAGCAGATGTCGACATTGTCATTGAAAGATGTGCGGGTGCAGGGCATATACGAGATGACATTTTTTATTACAACAGAGAATTTGAGAAGTTTACTGATCATGATGATGAGGAACGTGCATATCTTATGGACATGGGTATCAAGGCTCTGAGGCGGTATTTCTTCCTTATCACATTCAGATCCTATCTCTACTGCACCTCTCCTGCCAATATGGAATTTGCTGCATGGATGGATTCAAGACCGGAGCTTGGTCATCTATGTAACAATCTAAGAATTGATAAATAA 3756 0.4284 MSTIAKEPEQVMRMRGGSVLGKKTILKSDHFPGCQNKRLSPQIEGAPNYRQAESLHVHGVAIPTIDGIRNVLNHIGGKTAQVLWISLREEPLAYINGRPFVLRDVEKPFSNLEYTGINRERVEQMEARLKEDILMEAERYGNKILVTDELPDGQMVDQWEPVSCNSVKTPLEVYEELHVEGYLVDYERVPITDEKSPKELDFDILVHKISQADVNTEIIFNCQMGRGRTTTGMVIATLVYLNRIGASGFPRSNSIGRISQCMDNVADHLPNSEEAIRRGEYAVIRSLVRVLEGGVEGKRQVDKVIDKCAAMQNLREAIATYRNSILRQPDEMKREASLSFFVEYLERYYFLICFAVYIHSEWAALCSSTAGHNSFADWMRARPELYSIIRRLLRRDPMGALGYSSLKPFLKQMAESTGDCPSDMGMVAALRNGEVLGSQTVLKSDHCPGCQNPSLPERVDGAPNFREIPGFPVFGVANPTIDGIRSVIYRISSSKGGCPILWHNMREEPVIYINGKPFVLREAERPYKNMMEYTGIDCERVEKMEARLKEDILREAKHYGSNIMVIHETDDGQIFDAWEHVTPDVIQTPLEVFKSLEADGFPIKYARVPITDGKAPENSDFDALAINITSAAKDTAFVFNCQMGRGRTTTGTVIACLVKLRMDFGRPIKILSDDVTHEESNGSSSIGDKAGGYVSALTSNTSQIKIEQKQNRVFGINDILLLWKITTLFDNGVECREALDAVIDRCSELQNIRQAVLQYRKVFNQQHVEPRVRRVALNRGAEYLERYFRLIAFAAYLGSEAFDGFCGQGECKMTFKDWLHQRPEVKAMKRSIRLRPGQFFTVSEELREPLESQHGDAVMEAIVKARNGSVLGKGSILKMYFFPGQRTSSHIQIHGAPHVFKVDEYPVYCMATPTISGAKEMLDYLDAKSKPSFTAQKVIMTDLREEAIVYINCVPFVLRELNKPVDTLKHVGITGPVVQHMEARLKEDILAEIRQFGARMLLHREEYNPSTDQSDVVGYWENIRADDIKTPAEVYSALKDDGYDIVYRRIPLTRERYALASDVDAIQYCQDDSARSYLFISHTGFGGVAYAMAIICIRLGAEANFASEVPPPSFGPHVDAVTEENLPSRAPNETALRMGDYRDILNLTRVLVHGPQSKADVDIVIERCAGAGHIRDDIFYYNREFEKFTDHDDEERAYLMDMGIKALRRYFFLITFRSYLYCTSPANMEFAAWMDSRPELGHLCNNLRIDK* 1252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03846 1251 CDD PTP_paladin 431 746 - -
Rops8g03846 1251 CDD PTP_paladin 15 308 - -
Rops8g03846 1251 FunFam Paladin isoform A 441 674 - -
Rops8g03846 1251 Gene3D Protein tyrosine phosphatase superfamily 878 1106 IPR029021 -
Rops8g03846 1251 Gene3D Protein tyrosine phosphatase superfamily 442 684 IPR029021 -
Rops8g03846 1251 Gene3D Protein tyrosine phosphatase superfamily 24 286 IPR029021 -
Rops8g03846 1251 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 9 244 IPR029021 -
Rops8g03846 1251 SMART PTPlike_phytase_2 941 1099 - -
Rops8g03846 1251 SMART PTPlike_phytase_2 503 659 - -
Rops8g03846 1251 SMART PTPlike_phytase_2 85 240 - -
Rops8g03846 1251 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 427 661 IPR029021 -
Rops8g03846 1251 FunFam Paladin isoform A 25 264 - -
Rops8g03846 1251 PANTHER TYROSINE SPECIFIC PROTEIN PHOSPHATASE AND DUAL SPECIFICITY PROTEIN PHOSPHATASE 424 1169 - -
Rops8g03846 1251 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 861 1064 IPR029021 -
Rops8g03846 1251 FunFam Paladin isoform B 878 1124 - -
Rops8g03846 1251 Pfam Inositol hexakisphosphate 85 239 - -
Rops8g03846 1251 Pfam Inositol hexakisphosphate 942 1097 - -
Rops8g03846 1251 Pfam Inositol hexakisphosphate 503 659 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g03846 Rops-Chr8 79264891 79275764 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03846 - - gmx:100788460 2220.28