Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03813 ATGCAAAAGTATAAGAAAGTGACTGCTTCAGAAGCTGATGGACACAATCTCGGATTTCTCGTTTTCACTTTCTCGGTGTTGCAAATTCTGAAATCTCTGCATTCGCCATTCTATTTTTCAGATCAGTTTCGAAGGGTAGATATGGCAAGCGGTATTCCAATGATGACTAAGCAACATCTACTGACCTACATTTACCTTCTAATTTATGTTTCACTTTCATCAGGGGTTATTCTGTATAACAAGTGGGTCCTCTCAACATTGTATTTTAATTTTCCATTTCCAATAACACTCACTATGATCCATATGGCTTTCTCTGGTTCAGTGGCCTTTTTGCTTATCCGTGTTCTGAAGGTTGTATCGCCTATTAAAATGACATTTAATATATATGCAACTTGTGTGGTCCCTATAAGTGCCTTCTTTGCAGCAAGTCTGTGGTTTGGGAACACTGCTTATTTGTACATTTCTGTGGCCTTCATCCAGATGCTTAAAGCCCTGATGCCTGTAGCAACATTTATCGTGGCTGTTATTTGTGGAACTGAGAAATTAAGGTGTGACGTGTTCTCGAACACGGTGCTGGTCAGTGTTGGAGTCGTCATTTCCTCCTATGGGGAAATTCATTTTAATGTGCTTGGTACAGTTTATCAGGTCACAGGAATACTTGCTGAAGCATTGAGGCTGGTATTAACTCAAGTTCTTCTTCAAAAGAAGGGCTTGACACTAAACCCTATTACCAGCTTGTATTACATAGCACCCTGCAGCTTTGTATTTCTTTTTATCCCATGGTATATTCTTGAGAAGCCCGAGATGGACGATCCACATATGCAGTTTAACTTCTGGATATTTTTTTCAAATGCTCTTTGTGCCCTGGCATTGAATCTTTCAACATTCTTAGTGATTGGTAGAACTGGGGCAGTAACTATTCGAGTGGCTGGAGTTTTGAAAGACTGGATTCTTATCAGTCTTTCAAGTGTCTTATTTCCTGAATCAAAGATTACCGGGCTTAATATTATTGGCTATGCTATTGCTTTAAGTGGTGTTGTTTTTTACAACTACCTGAAGATCAAGGATGCTCGCACATCTCAACCTCAAAGTAACCAAGATGAATCAGCAAAGGAGCTGCAGACGGAGAAAAAGGCGGATGATGATGTGAACAGGAATGAGGAGTCTTTATGGAAAGATTCAACTTCCGATACTCATTTAGATGAAGAAGCACCTTTTATCTCTTCTTCACGGATATCTCATTTTGGAAGAAAGCCAGCTTAG 1263 0.3967 MQKYKKVTASEADGHNLGFLVFTFSVLQILKSLHSPFYFSDQFRRVDMASGIPMMTKQHLLTYIYLLIYVSLSSGVILYNKWVLSTLYFNFPFPITLTMIHMAFSGSVAFLLIRVLKVVSPIKMTFNIYATCVVPISAFFAASLWFGNTAYLYISVAFIQMLKALMPVATFIVAVICGTEKLRCDVFSNTVLVSVGVVISSYGEIHFNVLGTVYQVTGILAEALRLVLTQVLLQKKGLTLNPITSLYYIAPCSFVFLFIPWYILEKPEMDDPHMQFNFWIFFSNALCALALNLSTFLVIGRTGAVTIRVAGVLKDWILISLSSVLFPESKITGLNIIGYAIALSGVVFYNYLKIKDARTSQPQSNQDESAKELQTEKKADDDVNRNEESLWKDSTSDTHLDEEAPFISSSRISHFGRKPA* 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03813 420 PANTHER SOLUTE CARRIER FAMILY 35 62 358 - -
Rops8g03813 420 Pfam Triose-phosphate Transporter family 64 350 IPR004853 -
Rops8g03813 420 MobiDBLite consensus disorder prediction 370 400 - -
Rops8g03813 420 MobiDBLite consensus disorder prediction 360 405 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g03813 Rops-Chr8 78803325 78815167 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g03813 54 417 Organic Solute Cotransporters AT3G17430 75.956 0.0 543
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03813 - - gmx:100779373 650.588
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g03813 8 78803325 78815167 Rops8g03813 8 78803325 78815167 ECH