Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03809 ATGGATTCAGCGAATGGAACAATAATGGCGGAGGAGCAACAATTGAGTGAATGGCGGGTGCATGGTGGCCCTTACCTCGGAGACATCTCAGCTCTCTGTTTTCTTCACCTTCCCAATCATTCTCTTCCTTTTCTCCTTGCTGGTTTGGGTTCGGAAATTCTGGTGTACGACTTAGAACTGGCAAAGATGATGAGATCCTTCTCCGTATTCCAAGGGGTTCGCGTCCATGGAATTACTTCTAGTGCTGCCTCTGCAATTGTAATTGCTGTGTTTGGGGAATCAAGAGTCAAACTATTCAGCTTCTCCTTTGACAATGATTCTGGGATCCCACACTTGACTCTCATTCATTTGTTGCCAAAGTTTGGTCACTGGGTTTTGGATGTTTGCTTCCTCAAGGGCTGTTTACCTGATTCCAATGTGGAGGGTCATTTTCTTGCAGTAGGATGTAGTGACAATTCAGTTCACATCTGGGACATCTCCAACTCTAATACTGTTCTCAAGGTTCAATCTCCAGTACGGTGCCTTCTGTACTCAATGCGATTATGGGGTCACAATCTTGAAGTTCTCCGTATTGCATCTGGTACAATATATAACGAGATTGTTGTTTGGAAAATAGCCCCTCAACATGAAAAATCTTCAAGAACTCGAGAAGACCATGATCATCTAAGCGTTTCATCCTCCAATGGCAGTCTGCTAAATGATAAACTGTATGAGGCTGTTCATATATGTAAACTTATTGGACATGAAGGTTCAATCTTCCGAATAGCATGGTCGTCTTGTGGATCTAAACTGGTATCTGTCTCTGATGACCGTAGTGCACGAGTCTGGGCTGTTCCTATTGAAAGGGAAGATTCGTTGTACCATGATCCTGTTGCCCTTGTTTTATTTGGACATAATGCTCGAGTTTGGGACTGCTGCATTTCTGATTATTTTATTGTCACTGTCAGTGAGGATTGTACATGTCGTATGTGGGGAGTTGATGGTGAACAGCTGCAAGTCATTAAGGAGCACATAGGGAGGGGCATATGGAGATGTTTGTACGATCCAAATTCATCACTTCTTATAACTGCCGGGTTTGACTCTGCTATTAAAGTGCATAGGCCTCATGCTTCTCTGTCCAGGGGCTTGGCAGCAGCACAAGGGTCCCCTGGCAGGACAGAGATGTTTTCCATTTGTATCCCTAATGTGTTGGAGCATACTGGATTCATGAACAGCAAGAGTGAATATGTTCGTTGTTTGCGTTTTTCCTGTCAGGATTCTCTTTATGTTGCTACCAATCGTGGTTATCTCTACCATGCTAAATTATGTGATACAGGAGGTGCTCAGTGGAATCAACTTGTCCAGGTTAGCAATGAGGTACCAATTATCTGTATGGATTTATTGTCCAAGAACTCATTTGAACTTGACTGTGGTGCTGAGGATTGGATTGCCATTGGAGATGGTAAAGGAAATATGACAGTTATTGGAGTTACTTACGATGATTGCACTCCTACAGTGAGCTTGAGCTTTTCTTGGCCAGCTGAAATGGAGAGACAGCTCTTGGGCACCTACTGGTGCAAATCTCTAGGATGTAGGTATGTCTTCACAGCTGATCCTAGAGGAGCATTGAAACTCTGGAGGTTGCCTGACCCTTCACAATCTAATTTTCAGAGCTCCATGAGGAGTAACAGTGTTTCACGTGTAGCAGAGTTTGTATCTAGTTATGGAATGCGGATAATGTGTTTGGATGCATGCATGGAGGAAGAGGTCCTGGCATGTGGAGATCTACGTGGTAACATGGCTCTGTTCCCTTTGCTAAAGAATCTGGTGCTGGGCACATCTGTTGCTCAAAAAATGAAAATACCTCCCGTAAATCGTTTCAAAGGAGTTCATGGGATTTCAAGTGTCTCCAGTATTTTTGTGACTAAGCTTGGTTGCAATCAAATCGAGATATGCTCAACTGGCGCAGATGGTTGTATATGCTACCTGGAATATGATAGAGAAATGCAGAATTTGCAATTTACGGGGATGAAACAAGTGAAAGAGTTGACTTTGATTGAACATGTTTCTGTGGATAATGACTCTCTTGATACATTATCAAGCAGCTATGCAGCTGGTTTTGCATCTGTAGATTTCATAGTTTGGAACTTAGTTAACGAGAATAAGGTGGTGAAAATTCCATGTGGTGGATGGCGGCGTCCTCATTCTTATTATCTAGGTGATGTACCAGAGATGAAGAACTGCTTTGCCTTTGTCAAGGATGAAATGATACATATACATAGACACTGGGTTCATGATAGAGATGGGAAGATATACCCTCAGAGTTTGCATATGCAATTCCATGGGAGAGAGATACATTCCTTGTGCTTTATCTCCGAAGATATGCATCTTGGAGATAATTATAAGCATGCCTTATTTTCCAAATCAAGTTGGATTGCAACTGGATGTGAAGATGGAACTGTGAGGTTGACTTGGTGCTCTCCAGGTATTGAAAATTGGTCCATGTCAAAATTGCTTGGTGAACATGTAGGAGGATCGGCTGTAAGATCAATCTGTTGCGTGTCAAAACTACACACCATTTCATCATATACAACTGATGTACCTGATGGGAGGAGTGAACTGAATGCTGCTGTTGAGGACAAATATAATCCAACCTTACTGATATCAGTGGGTGCCAAGCGTGTCTTAACGTCTTGGCTACTAAAAAATAGGAGGCTGGACAACAAAAATGACTTCCTAACTGATCATCAATATAATTCAAAAGGAGTTGATGATCAATTTTTGTCAAGTTTGTCTTCATCTATGACATTTCAGTGGCTTTCCACTGACATGCCAGCCAAATATTCAATTACACACAAATATCCAGAAAATAATGTGGAGAAAGTAGTTGGCGTTGCGGAAAATGTTTCTGATACAACTGAAAGGGGAATGATGAACTTGATCAGAGATAAACATGAGGATGACTGGAGATATCTTGCAGTCACTGCTTTTCTTGTTAAATGTGCTGGTTCCAGGATAACTGTATGTTTTGTCATTGTTTCTTGTTCAGATGCTACACTTATGTTACGGGCTTTAATTTTGCCCTTTCGTTTATGGTTTGACATCGCATTACTTGTTCCTTTATTGGCACCTGTTCTATCATTGCAGCATATGATCTTTCCAATGTGTAGGCCTTATAAAGGAAACATCCAAGTTGGAAATTCTTATATAGTAATTAGTGGATCTACTGATGGAAGTGTTACCTTTTGGGACCTGACTGACAGTGTAGAAGCTTTTATGCGGTGGGTTTCAGTTTGTGATGTAGAGAAGTTTTTCGATTGTCAAAAACGACCACGCACAGGGAGAGGAAGTCAGGGTGGTAGACAGTGGAGATATTTAAGCAGTGGCTTGTCAAAAAAGAGACAAGACAGTGGTCTGGTCACTTTAAATGCCAAAGACGAGGCTGAAAGCATCAGTAATGCTACACATGGGGCCTCTTCAGTGCCAAATGATTCTGAAGATGGCAAGATGGCTTGTTCTCAAGCCATGCATACAGCTCCCCATGAGTTAGAAATTAAGACTGATAATTCGTCAGTGGAAATATGTGAAATACAGCCTCTACATCGTTTACAAAATATTCACCAATCTGGTGTCAACTGCCTCCATGTTTCAGAGATAAAGGGTGGCCAAAATACTGATGGTTGTCATGTGTATAGTATAATTAGTGGGGGTGATGATCAAGCACTTAATCATCTCATAGTCGAATTATCACCTAAATCAATGAATTTAGCTAAAGGGATTTTGACCCCAGATATCACACATTCGGTCTCTGAACCTGAACATGGAAAAGACAACAATTTTCAATGTCAGAGCAAGAATTGTGAGATTAAATTCTTAAATTATGAAAAAATTCCCTCAGCCCACAGCTCTTCTGTGAAAGGTGTCTGGACAGATGGATCTTGGGTGTTTTCAACCGGACTTGATCAGCGGGTCAGATGCTGGCATCTTCACCAGAGTAAACTAATTGAATATGCACATCTAATAGTTAGTGTGCCAGAGCCAGAAACATTATCTGCTAGGGCTTGTGGCAGGAACCATTATCAGATTGCTGTTGCTGGAAGAGGGATGCAACTAGTTGACTTTTCAGGATCCTGA 4113 0.4162 MDSANGTIMAEEQQLSEWRVHGGPYLGDISALCFLHLPNHSLPFLLAGLGSEILVYDLELAKMMRSFSVFQGVRVHGITSSAASAIVIAVFGESRVKLFSFSFDNDSGIPHLTLIHLLPKFGHWVLDVCFLKGCLPDSNVEGHFLAVGCSDNSVHIWDISNSNTVLKVQSPVRCLLYSMRLWGHNLEVLRIASGTIYNEIVVWKIAPQHEKSSRTREDHDHLSVSSSNGSLLNDKLYEAVHICKLIGHEGSIFRIAWSSCGSKLVSVSDDRSARVWAVPIEREDSLYHDPVALVLFGHNARVWDCCISDYFIVTVSEDCTCRMWGVDGEQLQVIKEHIGRGIWRCLYDPNSSLLITAGFDSAIKVHRPHASLSRGLAAAQGSPGRTEMFSICIPNVLEHTGFMNSKSEYVRCLRFSCQDSLYVATNRGYLYHAKLCDTGGAQWNQLVQVSNEVPIICMDLLSKNSFELDCGAEDWIAIGDGKGNMTVIGVTYDDCTPTVSLSFSWPAEMERQLLGTYWCKSLGCRYVFTADPRGALKLWRLPDPSQSNFQSSMRSNSVSRVAEFVSSYGMRIMCLDACMEEEVLACGDLRGNMALFPLLKNLVLGTSVAQKMKIPPVNRFKGVHGISSVSSIFVTKLGCNQIEICSTGADGCICYLEYDREMQNLQFTGMKQVKELTLIEHVSVDNDSLDTLSSSYAAGFASVDFIVWNLVNENKVVKIPCGGWRRPHSYYLGDVPEMKNCFAFVKDEMIHIHRHWVHDRDGKIYPQSLHMQFHGREIHSLCFISEDMHLGDNYKHALFSKSSWIATGCEDGTVRLTWCSPGIENWSMSKLLGEHVGGSAVRSICCVSKLHTISSYTTDVPDGRSELNAAVEDKYNPTLLISVGAKRVLTSWLLKNRRLDNKNDFLTDHQYNSKGVDDQFLSSLSSSMTFQWLSTDMPAKYSITHKYPENNVEKVVGVAENVSDTTERGMMNLIRDKHEDDWRYLAVTAFLVKCAGSRITVCFVIVSCSDATLMLRALILPFRLWFDIALLVPLLAPVLSLQHMIFPMCRPYKGNIQVGNSYIVISGSTDGSVTFWDLTDSVEAFMRWVSVCDVEKFFDCQKRPRTGRGSQGGRQWRYLSSGLSKKRQDSGLVTLNAKDEAESISNATHGASSVPNDSEDGKMACSQAMHTAPHELEIKTDNSSVEICEIQPLHRLQNIHQSGVNCLHVSEIKGGQNTDGCHVYSIISGGDDQALNHLIVELSPKSMNLAKGILTPDITHSVSEPEHGKDNNFQCQSKNCEIKFLNYEKIPSAHSSSVKGVWTDGSWVFSTGLDQRVRCWHLHQSKLIEYAHLIVSVPEPETLSARACGRNHYQIAVAGRGMQLVDFSGS* 1371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03809 1370 ProSiteProfiles Trp-Asp (WD) repeats profile. 245 276 IPR001680 GO:0005515
Rops8g03809 1370 SUPERFAMILY WD40 repeat-like 1060 1328 IPR036322 GO:0005515
Rops8g03809 1370 SMART WD40_4 1284 1321 IPR001680 GO:0005515
Rops8g03809 1370 SMART WD40_4 238 277 IPR001680 GO:0005515
Rops8g03809 1370 SMART WD40_4 765 818 IPR001680 GO:0005515
Rops8g03809 1370 SMART WD40_4 288 325 IPR001680 GO:0005515
Rops8g03809 1370 SMART WD40_4 111 158 IPR001680 GO:0005515
Rops8g03809 1370 SMART WD40_4 1042 1077 IPR001680 GO:0005515
Rops8g03809 1370 SMART WD40_4 327 367 IPR001680 GO:0005515
Rops8g03809 1370 SUPERFAMILY WD40 repeat-like 523 859 IPR036322 GO:0005515
Rops8g03809 1370 Gene3D - 1055 1336 IPR015943 GO:0005515
Rops8g03809 1370 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 295 1081 IPR011047 -
Rops8g03809 1370 ProSiteProfiles Trp-Asp (WD) repeats profile. 141 167 IPR001680 GO:0005515
Rops8g03809 1370 Gene3D - 286 657 IPR015943 GO:0005515
Rops8g03809 1370 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 245 276 - -
Rops8g03809 1370 SUPERFAMILY WD40 repeat-like 44 366 IPR036322 GO:0005515
Rops8g03809 1370 ProSiteProfiles Trp-Asp (WD) repeats profile. 1060 1086 IPR001680 GO:0005515
Rops8g03809 1370 Pfam WD domain, G-beta repeat 122 158 IPR001680 GO:0005515
Rops8g03809 1370 Pfam WD domain, G-beta repeat 243 276 IPR001680 GO:0005515
Rops8g03809 1370 Gene3D - 230 285 IPR015943 GO:0005515
Rops8g03809 1370 Gene3D - 3 229 IPR015943 GO:0005515
Rops8g03809 1370 PANTHER WD REPEAT PROTEIN 22 1369 - -
Rops8g03809 1370 MobiDBLite consensus disorder prediction 1144 1164 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03809 K24737 - gmx:100780968 2325.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g03809 8 78740381 78753612 Rops8g03809 8 78740381 78753612 ECH