Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03779 ATGGCTGCCAGAACGCACGTGTTTAGTGCTGTGAGTTTTCAGCTCAAAGAAGCTGAGATGCCTTTTACAGGTTCCAGCGTAATCTGGAAGCATCTGGGAGATTGTCCTCAGCGCAATGTGGCCCTAAGACGCAAACGAAATGTGGTGATTATTCCCAAAGTCAGAGCCCAGAATCGTCTTGACTATGCTCCAGATTCCAAGTTTTATAAGATCGAAGCGATTCTCAGGCCCTGGCGAGTTCCTCAGGTTTCTTCGGCTTTGTTGAAAATGGGAATTCGTGGTGTCACTGTATCTGATGTCAGGGGCTTTGGTTCTCAGGGTGGTTCGACAGAGAGGCAGGGAGGCTCTGAATTTTCTGAAGACAATTTTGTTGCCAAAGTTAAAATGGAAATAGTGGTGACAAAGGACCAGGTTGAGGCAGTAATAGACAAAATAATTGATGAGGCAAGGACTGGGGAGATTGGTGATGGCAAAATTTTCTTGATCCCTGTATCGGATATTATAAGAATTCGCACAGGTGAGCGGGGGGAGCAGGCAGAGAGGATGACTGGGGGGCGAACTGACATGTGA 570 0.4719 MAARTHVFSAVSFQLKEAEMPFTGSSVIWKHLGDCPQRNVALRRKRNVVIIPKVRAQNRLDYAPDSKFYKIEAILRPWRVPQVSSALLKMGIRGVTVSDVRGFGSQGGSTERQGGSEFSEDNFVAKVKMEIVVTKDQVEAVIDKIIDEARTGEIGDGKIFLIPVSDIIRIRTGERGEQAERMTGGRTDM* 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03779 189 Pfam Nitrogen regulatory protein P-II 69 176 IPR002187 GO:0006808|GO:0030234
Rops8g03779 189 SMART P_II_3 71 173 IPR002187 GO:0006808|GO:0030234
Rops8g03779 189 SUPERFAMILY GlnB-like 69 179 IPR011322 -
Rops8g03779 189 ProSitePatterns P-II protein C-terminal region signature. 151 164 IPR017918 GO:0006808|GO:0030234
Rops8g03779 189 PANTHER NITROGEN REGULATORY PROTEIN P-II 35 189 IPR002187 GO:0006808|GO:0030234
Rops8g03779 189 ProSiteProfiles P-II protein family profile. 68 180 IPR002187 GO:0006808|GO:0030234
Rops8g03779 189 Gene3D - 56 189 IPR015867 -
Rops8g03779 189 PRINTS P-II protein signature 69 84 IPR002187 GO:0006808|GO:0030234
Rops8g03779 189 PRINTS P-II protein signature 151 171 IPR002187 GO:0006808|GO:0030234
Rops8g03779 189 PRINTS P-II protein signature 90 108 IPR002187 GO:0006808|GO:0030234
Rops8g03779 189 PRINTS P-II protein signature 120 143 IPR002187 GO:0006808|GO:0030234
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03779 - - gmx:100499915 309.686
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g03779 8 78376789 78380138 Rops8g03779 8 78376789 78380138 ECH