Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03769 ATGGCTACTCTAACCCCAATTTGTTCGTTAACCAAATCGAATGGTCAACAAAACCAACAACCTCACCGTTTTCATCAACTGAATTTGGCGGTTTTCAATTTCATAACTACACGGAAGCAAAAGAGAATCTCAATCTCACTGGCCTCTGCTCCAAACCAGAATCAGTCTTCTCCTGGTTTGTACTCTGCTCAGAAATTTGACCTAACCGCTTCCAACGTTGACCTCGTTCTCGACGATGTTCGCCCTTACCTCATCTCCGACGGCGGCAACGTCGACGTCGTCTCCGTCGAAGATGGCGTTATATCTCTGAGACTCCAAGGAGCATGCGAAAGTTGTCCAAGCTCAACCACAACAATGAAAATGGGGATCGAGCGTGTTCTTAAGGAAAAATTTGGAGATGCTGTAAAAGATATAGTGCAAGTATATGATGATGATCAACCAAGGGAGACCACCGTTGAGGCTGTGAATAATCATCTAGAGATATTGAGACCAGCAATTAAGAATTACGGAGGGAGCGTGCAAGTGTTATCTGTTGAAGGTGGGGAGTGCCTTGTAGAGTATGTTGGGCCTGATTCCATTGGATCAGGAATCAAAGCCGCTATCAAGGAGAAGTTTTCAGATATTCTCAATGTTACCTTCACCACCACCACCTAG 654 0.4495 MATLTPICSLTKSNGQQNQQPHRFHQLNLAVFNFITTRKQKRISISLASAPNQNQSSPGLYSAQKFDLTASNVDLVLDDVRPYLISDGGNVDVVSVEDGVISLRLQGACESCPSSTTTMKMGIERVLKEKFGDAVKDIVQVYDDDQPRETTVEAVNNHLEILRPAIKNYGGSVQVLSVEGGECLVEYVGPDSIGSGIKAAIKEKFSDILNVTFTTTT* 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03769 217 SUPERFAMILY Fe-S cluster assembly (FSCA) domain-like 149 214 IPR034904 -
Rops8g03769 217 Gene3D - 65 150 IPR034904 -
Rops8g03769 217 PANTHER IRON-SULFUR CLUSTER SCAFFOLD PROTEIN NFU-RELATED 57 213 - -
Rops8g03769 217 Gene3D - 151 213 IPR034904 -
Rops8g03769 217 SUPERFAMILY Fe-S cluster assembly (FSCA) domain-like 71 142 IPR034904 -
Rops8g03769 217 FunFam NifU-like protein 3, chloroplastic 65 148 - -
Rops8g03769 217 Pfam NifU-like domain 73 133 IPR001075 GO:0005506|GO:0016226|GO:0051536
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g03769 Rops-Chr8 78201654 78203123 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03769 K22074 - gmx:100527356 311.227
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g03769 8 78201654 78203123 Rops8g03769 8 78201654 78203123 ECH