Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03763 ATGTGTTGTTTCCTTGTTTGTGGAAACGTAATCGACGCTTTGCAGTTCGGGAAGAAACATCATCTTCTTCATCCTCCATCCTCAGTAGGGTATCTTTTGATGGCAAATAGACCGGATCCAGATATTGATGATGATTTTCGTGAGCTTTATAAGGAGTACACTGGCCCTCCGGGAACTGCTACTACGAATACCCAAGAGAGGGCAAAATCAAACAAAAGGTCTAATGCAGGGTCTGATGAGGAGGAGGAACCTCGGGACCCTAATGCTGTCCCGACTGATTTCACCAGCCGAGAAGCTAAGGTTTGGGAGGCTAAGTCAAAAGCTACTGAGAGGAATTGGAAGAAAAGGAAAGAAGAAGAAATGATATGCAAACTCTGTGGAGAATCAGGGCATTTCACTCAGGGTTGTCCATCTACCCTTGGAGCAAACCGCAAGTCTCAAGATTTCTTTGAAAGGATACCTGCAAGAGACAAAAATATGCGAGCACTTTTCACAGAGAAAGTTATAAGCAAGATTGAAAGAGATATTGGCTGCAAAATTAAGATGGACGAGAAATTTATTATTGTCAGTGGTAAGGATAGATTAATTTTGGCAAAAGGTGTTGATGCTGTGCACAAGATTAGAGAGGAGGGTGATCAAAAGGGGTCTTCTAGTTCTCACATGAACAGATCAAGGTCACCTGAGAGAAGAAGTCCTGTTAGTGCTCGGTTTCAACGGTCTGAACCCCAAAGATCGCATTCTGCACCACGAAATACATCCCAGTTTCAACAAAGGTTTGGTAGGCAAGAGAGGGCTGTTGAAGACCGTGTCCGGGAGGACACTCAAAAGTTTGCAAGAGGCTCTCCACAAGCAAGAGGTAAGTTCTTAGCCTTCAAGAATTATCTCCGTCCTGAAGGGTTACCTCCATTACGAACATATTTACTGAAAGGATTGGCTCCCATGGTTTCATGCTTAACATACTCTTCATTTCGTGAAGCTTATGGTAATAGTGGAGCTAGAGGTCGTTCAAGCCAGTCAAGATCTCCAAGACAGGCCTCTTATACAGGGAACTCATATAATTCATTTGATGGCCGTAATCAAAACATGGGTACTTATAGGAATGATGGGTGGGATTCTCATAGAAGAGAACCTGGTATCCAATCCGGTCATCAGTTTGATTACAATGCCTCACCTCAGACTTTAGAAGAATTAGAGTTGGAGTATCAGAATGAGTTAATGGAGCTAACGAAAATTCGTGACAGAGAAGAAGATGAAGAAAATTTCAAGCATCGTGAGGCTATTAGAGATTTGAGGGAAAAATACACGAGTAAAGTTGCTTTGGTGAAGGCCACACACGCAAAACAATGGGAAGAATTTCTTCAGCTTGATGCCCAGAGGCATCAACAGCAGGCAATCCAACAAATGTCTTCTGGATATCGGGGTTATAAACAGCAGAATTTTGCCGAATATGATGGGTCCACTGTCAACCCTCCCTATGCTGGATCCAATTTACCCTTGGAATCGAGGAACAGGTTCTCAGACACTATGGAGGCTTATCCTTCAAGGCCTCATGATAATTTTGGTGAATTTCAGAGACGTGGGGATTTTACAAAAGCTTACAACAGATATTAA 1611 0.4283 MCCFLVCGNVIDALQFGKKHHLLHPPSSVGYLLMANRPDPDIDDDFRELYKEYTGPPGTATTNTQERAKSNKRSNAGSDEEEEPRDPNAVPTDFTSREAKVWEAKSKATERNWKKRKEEEMICKLCGESGHFTQGCPSTLGANRKSQDFFERIPARDKNMRALFTEKVISKIERDIGCKIKMDEKFIIVSGKDRLILAKGVDAVHKIREEGDQKGSSSSHMNRSRSPERRSPVSARFQRSEPQRSHSAPRNTSQFQQRFGRQERAVEDRVREDTQKFARGSPQARGKFLAFKNYLRPEGLPPLRTYLLKGLAPMVSCLTYSSFREAYGNSGARGRSSQSRSPRQASYTGNSYNSFDGRNQNMGTYRNDGWDSHRREPGIQSGHQFDYNASPQTLEELELEYQNELMELTKIRDREEDEENFKHREAIRDLREKYTSKVALVKATHAKQWEEFLQLDAQRHQQQAIQQMSSGYRGYKQQNFAEYDGSTVNPPYAGSNLPLESRNRFSDTMEAYPSRPHDNFGEFQRRGDFTKAYNRY* 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03763 536 SUPERFAMILY Retrovirus zinc finger-like domains 110 142 IPR036875 GO:0003676|GO:0008270
Rops8g03763 536 MobiDBLite consensus disorder prediction 261 278 - -
Rops8g03763 536 MobiDBLite consensus disorder prediction 208 281 - -
Rops8g03763 536 MobiDBLite consensus disorder prediction 50 108 - -
Rops8g03763 536 MobiDBLite consensus disorder prediction 56 71 - -
Rops8g03763 536 MobiDBLite consensus disorder prediction 72 88 - -
Rops8g03763 536 Coils Coil 394 418 - -
Rops8g03763 536 ProSiteProfiles Zinc finger CCHC-type profile. 123 138 IPR001878 GO:0003676|GO:0008270
Rops8g03763 536 PANTHER OS01G0252900 PROTEIN 34 536 - -
Rops8g03763 536 MobiDBLite consensus disorder prediction 236 260 - -
Rops8g03763 536 MobiDBLite consensus disorder prediction 328 360 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03763 - - gmx:100806099 781.556
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g03763 8 78156527 78160565 Rops8g03763 8 78156527 78160565 ECH