Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03757 ATGGCTCCTCCCAATGACCCTGTGAAGTCCACCTTGGAACTCATCAAGTCTGAGTCTTTGGAACAGGTTATTGATTTATCTGATGGGAAACTCACCGTTAGAGGTGTGCCTTTGCTCTCTCAGGTCCCTCAGAATGTATCTTTCAGTTCCTTCTCTTCTTCTATATGTCAATCCTCTGATGCCCCACCCTCAATCCTTCAACGTGTCCTTGCTCTGTCTCACAGAGGTGGCTTCTTTGGGTTCTCCCAGGAGGAACCTTCTGATAGATTGATGAACTCCTTGGGTAGTTTAACCGGCAGGGACTTCCTTAGTATCTTCAGGTTCAAAACCTGGTGGTCTACTCAGTGGGTGGGAAATTCTGGTTCAGATTTACAAATGGAAACCCAGTGGGTTCTCATTGATGTTCCTGAAATAAAATCCTATGTGATAATCATTCCCATCATTGAAGGAAGTTTTAGGTCTTCTTTTCATCCTGGCTCTGATGGGCATGTCATGATTTGTGCTGAGAGTGGTTCTACACAAGTGAAAGCATCAAGCTTTCAAGCAATTGCCTATATTCATGTGTCTGAAAATCCTTACAACTTGATGAAAGAGGCCTATAGTGCTCTGAGGGTTCATCTAAATACCTTCAGGCTCTTGGAAGAGAAAACACTGCCAAATCTGATTGACAAATTTGGTTGGTGCACTTGGGATGCTTTCTATTTAACGGTAGACCCTGTTGGAATTTGGCATGGTCTTAAGGATTTTGATGAGGGTGGTGTGGCTCCAAGGTTTGTTATCATTGATGATGGCTGGCAAAGCATCAATTTGGATGGTGGTGATCCCAACGAGGATGCCAAAAATCTTGTTCTAGGTGGTGAGCAAATGACTGCAAGGCTTCACAGGCTTGATGAAGGTGACAAGTTCAAAAAATACCATGCTGGTCTTCTATTGGGTCCAAATGCTCCTTCTTTCAATCCTAAGACTTTTAAGGACTTGCTTGCAAAGGGAATTGAACATGAACGTTTGGAGAGGCAAAGGGACGATGCAATCCTATCTGGGAGTTCCAATTTGGCTGAGATTGACTCAAGGATACAGCAGGTACTAAAAGAAATTGATGATCTCTTTGCTGGAGTGCAAAGCAGTGCTCCCAAAAAAGAATGTGGAAGCTGTGGTTGCAAAACAAAGGACCATGGATTGAAGGCTTTCACAAGGGACTTGAGGACTAGATTTAAAGGTTTGGATGACATTTATGTATGGCATGCACTTTGTGGTGCCTGGGGTGGTGTGAGGCCAGGAACCACACACCTAAATTCTAAAATTGTCCCTTGCAAACTCTCCCCTGGCCTTGATGGGACAATGCATGATCTTGCTGTGGTTAAGATAGTGAAAGGTTCAATCGGGCTTGTTCATCCTAATCAAGCCAAGGACTTCTACAATTCCATGCACTCGTATCTTGCTCAATCTGGTATCACTGGAGTCAAAGTGGACGTCATTCATACTCTTGAATATGTATGCGATGAATATGGAGGCAGGGTCGAGCTTGCTAAGGCTTACTATGATGGGTTGACAAACTCTATTGTCAAAAATTTTAATGGAAGTGGAATCATCGCTAGCATGCAGCAGTGTAACGACTTTTTCTTCCTTGGAACCAAGCAAGTTTCCATGGGAAGAGTTGGGGATGACTTTTGGTTTCAAGATCCTAATGGAGACCCAATGGGAGTATTTTGGTTACAAGGGGTACACATGATTCACTGTTCCTACAACAGTTTGTGGATGGGGCAGATGATTCAGCCTGATTGGGACATGTTCCAATCAGATCATGTGTGTGCCAAATATCATGCAGGTTCAAGGGCTATTTGTGGTGGTCCAATCTATTTGAGTGACAATGTGGGCTCCCATGACTTGGATCTGATTAAGAAGCTTGTGTTCCCTGATGGTACCGTACCCAAATGCACACATTTTCCCCTTCCAACCAGGGATTGTCTTTTCAGGAACCCTCTATTTGACCAAAAAACTGTTCTCAAAATTTGGAACTTTAACAAGTATGGAGGAGTAATTGGCGCTTTCAACTGTCAAGGGGCTGGTTGGGACCCTAAGGTGAAGAGGTTCAGGGGTTTCCCTGAGTGCTACAAGCCAGTATCTGGTACTGTGCATGTAACTGAGGTTGAATGGGACCAGAAGAAAGAAACAGCCCATATGGGCAAGGCAGAGGAGTATGTAGTGTACCTCAATCAGGCTGAGGAACTCCGTTTGATGACCCCAAAATGTGAACCAATCCAATTTACTATCCGACCTTCCACCTTTGAGCTCTATAGCTTTGTCCCAGTCACAAAGCTAGGTGGCAGCATCAAATTTGCTCCAATTGGGCTGACAAATATGTTAAACAGTGGAGGGACAATTCTAGAATTGGAATGTGTTGAGAATGGAGCTGAGGTTGGTGCTAAGCTTAAGGTTAAAGGTCGTGGGAATTTCCTTGCTTACTCAAGTGAATCTCCAAAGAAGTTCCAATTGAATGGTGCTGATGTCACTTTTGAGTGGCTGCCAGATGGCAAATTGACTCTCAACCTTCCTTGGATTGAAGAGGCTGGTGGGGTTTCTGATTTGGCAATTTTCTTCTAG 2601 0.4402 MAPPNDPVKSTLELIKSESLEQVIDLSDGKLTVRGVPLLSQVPQNVSFSSFSSSICQSSDAPPSILQRVLALSHRGGFFGFSQEEPSDRLMNSLGSLTGRDFLSIFRFKTWWSTQWVGNSGSDLQMETQWVLIDVPEIKSYVIIIPIIEGSFRSSFHPGSDGHVMICAESGSTQVKASSFQAIAYIHVSENPYNLMKEAYSALRVHLNTFRLLEEKTLPNLIDKFGWCTWDAFYLTVDPVGIWHGLKDFDEGGVAPRFVIIDDGWQSINLDGGDPNEDAKNLVLGGEQMTARLHRLDEGDKFKKYHAGLLLGPNAPSFNPKTFKDLLAKGIEHERLERQRDDAILSGSSNLAEIDSRIQQVLKEIDDLFAGVQSSAPKKECGSCGCKTKDHGLKAFTRDLRTRFKGLDDIYVWHALCGAWGGVRPGTTHLNSKIVPCKLSPGLDGTMHDLAVVKIVKGSIGLVHPNQAKDFYNSMHSYLAQSGITGVKVDVIHTLEYVCDEYGGRVELAKAYYDGLTNSIVKNFNGSGIIASMQQCNDFFFLGTKQVSMGRVGDDFWFQDPNGDPMGVFWLQGVHMIHCSYNSLWMGQMIQPDWDMFQSDHVCAKYHAGSRAICGGPIYLSDNVGSHDLDLIKKLVFPDGTVPKCTHFPLPTRDCLFRNPLFDQKTVLKIWNFNKYGGVIGAFNCQGAGWDPKVKRFRGFPECYKPVSGTVHVTEVEWDQKKETAHMGKAEEYVVYLNQAEELRLMTPKCEPIQFTIRPSTFELYSFVPVTKLGGSIKFAPIGLTNMLNSGGTILELECVENGAEVGAKLKVKGRGNFLAYSSESPKKFQLNGADVTFEWLPDGKLTLNLPWIEEAGGVSDLAIFF* 867
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03757 866 Gene3D Aldolase class I 223 635 IPR013785 -
Rops8g03757 866 SUPERFAMILY (Trans)glycosidases 222 635 IPR017853 -
Rops8g03757 866 Pfam Raffinose synthase or seed imbibition protein Sip1 25 849 IPR008811 -
Rops8g03757 866 PANTHER - 24 855 IPR008811 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g03757 Rops-Chr8 78093562 78097253 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g03757 1 866 Glycoside Hydrolase AT4G01970 57.853 0.0 1058
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03757 K06611 - gmx:100815922 1472.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g03757 8 78093562 78097253 Rops8g03757 8 78093562 78097253 ECH