Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03756 ATGTCGATCGGAGATGCTTTTCTATGCTTTCTATTCATCGCTACTTATTCGATTTCAGCTACTTCTGCTGATTCCATCTATGGTTGCGGTGGATTTATCGAGGCAAGCCCATCGTTGGTGAAGTCGAGGAAACAAACTGATGCCAAATTGGATTATTCACATGTCACGGTTGAGCTTCAAACAGTGGATGGACTGGTAAAGGACAGAACACAATGTGCTCCAAATGGATACTATTTTATTCCAGTATATGACAAGGGTTCCTTTGTAATTAAAATTAATGGACCTGAAGGATGGTCATGGGATCCAGAAAAGGTTCCTGTGGTAGTTGACAATAATGGTTGCAATGGCAATGAAGATATAAATTTTCGTTTCACAGGTTTCGCTATATCTGGTAGAGTTGTGGGAGCTGCAGGTGGAGAAAGCTGTTCAGTTAAAAATGGAGGTCCTTCAAATGTAAAAGTTGAACTATTCTCTCCTTCTGGGGATCTTGTCTCTTCAGTTTTAACTTCACCATCAGGGAATTACTTGTTTACAAATGTAATTCCAGGAAAATATGAACTACGTGCTTCAAATCCTGATATGAAAGTTGAAGTCAAAGGTTCTACGCAGGTGGAATTGGGCTTTGGAAATGGGGTAGTTGATGATATATTCTTTGTCCCTGGATATAGTATCAGTGGGTTTGTTGTTGCTCAGGGAAATCCAATATTAGGAGTCCACATTTTCTTATATTCAGATGATGTGTCTGAGGTAGAATGTTTGCAAGGTTCTGCTAATGGCCCACGACAAGGAGCAGCTCTCTGTCACGCTGTATCAGATGCTGATGGAAAGTTCGCATTCAATTCGATACCTTGTGGAAGTTATGAACTTGTGCCATACTATAAGGGTGAAAATACAGTATTTGATGTTTCGCCATCCAGTGTCTCAGTTAATGTTAAGCATCAACATGTATCAGTGCCTCAAAAATTTCAGGTAACTGGATTTTCTGTTGGAGGCCGGGTAGTCGCTGGAGATGACATGGGAGTGGAGGGTGTTGAGATCATAGTTGATGGTCATGGAAGGTGTATTACTGACAATCAAGGATATTATAAGCTTGATCAGGTCACATCCAAGCACTATACCATAGAGGCCCGAAAGGAGCATTACAAATTCAAGAAGTTGGAGAATTATATGGTATTGCCAAATATGACTTCAATAGAAGACATTAGCGCCATTTCATATGATCTTTGTGGTTTAGTTAGGATGGTTAGCAGTGGTATGAAAGCAACGGTGGCTTTGACTCATGGACCTGATAATGTGAAACCACAAAAGAAACAGACAGATGGAAATGGAAACTTCTGCCTTGAGGTTCTACCTGGGGAATATCGCTTGTCAGCTATTGCTGCTACTCCTGAGAATGCTGGACTTATGTTTGCTCCATCTTATATAGATGTTGTGGTCAAAAGTCCATTGTTGAATGTTGAATTTTCACAGGCTCTGGTCAATGTTCGTGGTGCTGTAGCCTGCAAGGAGAAATGCGGTCCATCTGTATCTGTTACACTCGTGAGACAGGTTGATAAACATAATGAAGAGAGAGAGACAATTAGCTTGACCACTGAAAGTAGTGAATTTCTGTTTTCAGATGTTATTCCTGGAAAATACAGGCTTGAGGTCAAACACAGTTCCCCTGATTCAGTGACCATGGAAGATAATTGGTGCTGGGAGCAGAGCTCTGTAGATGTAAATGTTGGAGCCGAGGACTTAGAAGGAATTTTTTTTGTTCAAAAAGGCTACTGGGTCAATGTTATCTCCACTCATGATGTTGATGGTTACATGACTCAACCAGATGGGTCAACTGTGAATTTGAAGATTCAGAAAGGTTCCCAGCATATATGTGTCGAATATCCTGGAGTACATGAATTTAGTTTTATTGACTCGTGTGTCTTCTTTGGGAGCTCATCTGTGAAAATTGATACATCTAATCTGTCGCCCATCCATCTTAAAGGAGAAAAGTATCTTCTTAAAGGACAAATAAATGTTCCGTCCGATTCACTTGATGCATTGCCTGAGAGTATAGCTGTTGATATTTATCATGAAGGAGCTGGTGTTGATAATGCTATGGCCATACTTAAGTCTCATGGGAAAGATCAAACAGATGCTGCTGTCTTTGAGTATTCTATTTGGGCCAATCCAGGAGAAAAGCTTACCTTTGTTCCTTGGGACTCAAGGAATGATGTGAAGAAAAAACTTCTATTTTATCCAAGAGAACATGATGTATCAGTGACGGGCGATAATTGTCAAGCTAATATTCCTACATTTTCTTGTCGACTGGGTGTATATATTGACGGATCAGTTTCACCTCCTCTATCTGGTGTTCTAATTAGGACTTTTGCTGCTGGAGACAGCAGCATCACTGGACTTAAAAGTGGTGAATTAGTACTTGGAACGACCACTGGAGCTGATGGCTCCTTTGTGGCAGGTCCTCTGTATGATGATGTTGGTTACGATGTCCAGGCTTCAAAGCCTGGTTATCATTTAAAACAAGTTGGGCCTTATTCCTTTAGTTGTCAGAAGCTTAGTCAAATTTCAGTACACATACATCACAAAGATGATGCTAAAGAACTCATTCCTTCTGTCCTGTTATCTTTAAGTGGTGACAATGGTTATAGAAACAACTTAGTATCTGAGGCTGGAGGGACATTCCTATTTGATAATTTGTTTCCCGGAATGTTCTATTTGCGTCCTGTTTTGAAGGAGTATGCTTTCTCACCTCCAGCGCAGGCAATAGAGCTTGGAGCAGGGGAGTTCAGAGAAGTTGTTTTCCAGGCCACACGAGTAGCTTACAGTGCTACAGGCTTAGTCACTCTTTTGTCTGGCCAACCCAAAGGAGGAGTTTCAGTTGAAGCCCGGTCAGAATCAAAAGGCTATTTTGAGGAAACTGTGACAGATTCCTCTGGGAATTATCGTCTGAGAGGGCTACTGCCTGATACTGTCTATGTTGTCAAAGTTGCAAAAAGGGATGTTATGGGCAGTTCTAATATAGAGCGTGCATCTCCAGATTCTATTGCTGTCAAGGTTGGAACTGAGGATATCAAAGGTTTGGATTTTATAGTTTTTGAGGAGCCGGAAATGACAATTGTAAGTTGCCACGTCGAAGGAAATGGCACGGATGAACTTCTTAAACACCTGATGGTAGAAATCAGGTCAGCTAGTGACTCAACCAAGATAGAGTCAGTCTTCCCCCTGCCAATTTCTAATTTCTTCCAAGTGAAGGGCTTATCAAAGGGAAGACACCTTCTACAGCTTCAATCTGGTCTCCCCTCAAGCTCGCTTAAATTTGAATCTGATATCATTGAGGTCGACTTGGACAAAAATATTCAAATCCATGTGGGCCCACTGAGATACAGGATTGAAGATCAGCTGAAGCAGGAGTTAACTCCGGCACCAGTATTTCCCCTTATAGTTGGATTTTTAGTTGTTGCACTATTTCTCAGCATGCCAAGGTTGAAGGATTTGTATCAAGCCACCATAGACATACCTACACCAGGACTCGCTGCGACTTCAAGAAAAGACACGAGGAAGCCAACATTGCGAAAGAAGACTTATTAA 3585 0.4134 MSIGDAFLCFLFIATYSISATSADSIYGCGGFIEASPSLVKSRKQTDAKLDYSHVTVELQTVDGLVKDRTQCAPNGYYFIPVYDKGSFVIKINGPEGWSWDPEKVPVVVDNNGCNGNEDINFRFTGFAISGRVVGAAGGESCSVKNGGPSNVKVELFSPSGDLVSSVLTSPSGNYLFTNVIPGKYELRASNPDMKVEVKGSTQVELGFGNGVVDDIFFVPGYSISGFVVAQGNPILGVHIFLYSDDVSEVECLQGSANGPRQGAALCHAVSDADGKFAFNSIPCGSYELVPYYKGENTVFDVSPSSVSVNVKHQHVSVPQKFQVTGFSVGGRVVAGDDMGVEGVEIIVDGHGRCITDNQGYYKLDQVTSKHYTIEARKEHYKFKKLENYMVLPNMTSIEDISAISYDLCGLVRMVSSGMKATVALTHGPDNVKPQKKQTDGNGNFCLEVLPGEYRLSAIAATPENAGLMFAPSYIDVVVKSPLLNVEFSQALVNVRGAVACKEKCGPSVSVTLVRQVDKHNEERETISLTTESSEFLFSDVIPGKYRLEVKHSSPDSVTMEDNWCWEQSSVDVNVGAEDLEGIFFVQKGYWVNVISTHDVDGYMTQPDGSTVNLKIQKGSQHICVEYPGVHEFSFIDSCVFFGSSSVKIDTSNLSPIHLKGEKYLLKGQINVPSDSLDALPESIAVDIYHEGAGVDNAMAILKSHGKDQTDAAVFEYSIWANPGEKLTFVPWDSRNDVKKKLLFYPREHDVSVTGDNCQANIPTFSCRLGVYIDGSVSPPLSGVLIRTFAAGDSSITGLKSGELVLGTTTGADGSFVAGPLYDDVGYDVQASKPGYHLKQVGPYSFSCQKLSQISVHIHHKDDAKELIPSVLLSLSGDNGYRNNLVSEAGGTFLFDNLFPGMFYLRPVLKEYAFSPPAQAIELGAGEFREVVFQATRVAYSATGLVTLLSGQPKGGVSVEARSESKGYFEETVTDSSGNYRLRGLLPDTVYVVKVAKRDVMGSSNIERASPDSIAVKVGTEDIKGLDFIVFEEPEMTIVSCHVEGNGTDELLKHLMVEIRSASDSTKIESVFPLPISNFFQVKGLSKGRHLLQLQSGLPSSSLKFESDIIEVDLDKNIQIHVGPLRYRIEDQLKQELTPAPVFPLIVGFLVVALFLSMPRLKDLYQATIDIPTPGLAATSRKDTRKPTLRKKTY* 1195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03756 1194 SUPERFAMILY Cna protein B-type domain 146 197 - -
Rops8g03756 1194 SUPERFAMILY Starch-binding domain-like 940 997 IPR013784 GO:0030246
Rops8g03756 1194 Gene3D Immunoglobulins 137 217 IPR013783 -
Rops8g03756 1194 PANTHER CARBOXYPEPTIDASE REGULATORY REGION-CONTAINING 20 1184 - -
Rops8g03756 1194 SUPERFAMILY Cna protein B-type domain 862 919 - -
Rops8g03756 1194 SUPERFAMILY Carboxypeptidase regulatory domain-like 327 394 IPR008969 -
Rops8g03756 1194 FunFam Carbohydrate-binding-like fold 143 215 - -
Rops8g03756 1194 SUPERFAMILY Starch-binding domain-like 219 302 IPR013784 GO:0030246
Rops8g03756 1194 Gene3D - 334 405 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03756 K26500 - gmx:100815384 2117.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g03756 8 78028309 78046856 Rops8g03756 8 78028309 78046856 ECH