Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03753 ATGGATCTCAACAAAAGCCTTCTCCTCATTGTATCCCTCTCTTCTCTTCTCCTATCCAGCCATGCCTTACCTTCTTCAGCACCCAATGTTGCCCCATCTATCTCACCATCTCCTTTAACATCAAAACAAGGTGTCTTTTTGAACTCCATCTTTGAAGAAGCTGTGGAAGTTAGCAAACAGGTGTTCAAGCCTGAGCCTGAGGTAGTGGAATTCTGCACTGGTACAGAGAATCCAACCCTTTGTGCTGAAACCATTGCCCCATTTTTCCAAGGTTCTTTTGACCCCATTAAGGCTCTTGAGACTGAGATTGAGGTCACCCTCAACCAAAGCTTGAAGGTTGCTGGTGTCATTGCCAAATCACTTGTTGACCCTGCCACCAATAAAGAAGCACTTGATGCCCTTGACATTTGCAAGTCACAATATGAAAATATTGTTGATAACATCAAAGAAGCCATTGAGTTATTGAACCAACAAAATGTGGTTGATGCTTACTATAAATTCAGCTCTGTGATATCATACAGATCTGCTTGTGAGGATGCTTTTACTGAATCTCCAGGAGTTGACAACCCATTGGGTGATGATTCTTTGGCTGTTTATCAATTGGGTGGCAATTGCTTGGCCATTATGGATGGGATAGTTAACAATCATAACAAGTTCTCCATATAA 666 0.4189 MDLNKSLLLIVSLSSLLLSSHALPSSAPNVAPSISPSPLTSKQGVFLNSIFEEAVEVSKQVFKPEPEVVEFCTGTENPTLCAETIAPFFQGSFDPIKALETEIEVTLNQSLKVAGVIAKSLVDPATNKEALDALDICKSQYENIVDNIKEAIELLNQQNVVDAYYKFSSVISYRSACEDAFTESPGVDNPLGDDSLAVYQLGGNCLAIMDGIVNNHNKFSI* 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03753 221 NCBIfam pectinesterase inhibitor domain 55 210 IPR006501 GO:0004857
Rops8g03753 221 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 68 210 IPR035513 -
Rops8g03753 221 Gene3D Invertase/pectin methylesterase inhibitor family protein 67 212 IPR035513 -
Rops8g03753 221 FunFam Invertase/pectin methylesterase inhibitor family protein 65 212 - -
Rops8g03753 221 Coils Coil 138 158 - -
Rops8g03753 221 CDD PMEI-like_2 65 212 - -
Rops8g03753 221 SMART PMEI_2 63 208 IPR006501 GO:0004857
Rops8g03753 221 Pfam Plant invertase/pectin methylesterase inhibitor 69 208 IPR006501 GO:0004857
Rops8g03753 221 PANTHER PECTINESTERASE INHIBITOR-LIKE 36 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g03753 Rops-Chr8 77965368 77966351 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03753 - - gmx:102660506 239.58