LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Rops8g03752	ATGGAAGATTTAGGCAGTACTCGGTTTGATGGTCTCAGCAATGCTGTGAGGAGGAAGAGGAGTCAAACATCGCGCAGGCCTCGACCTGATTCACAGCCTGTTTCAGAAGGTCATGACTTATCTCCCCTGTCATCAACGCCGCCTTCGGAGGATGCCGGCAAGGCCTCTAGTGATGAGAATGCCGGTTTTGATACTAATTCCAAGAGAAAAGAATTCAATCTTAACCATTGTGTCCCTCAGGTCTCCTCTGCTACTGGATCTGAAGACGATAAATCCCATAAAAAGAGTAGAAAGGATGCAGGGTTCCATGCATTTTACAATAGTGAGCCTGGACGGAGTGGTTTATCTAATAAGCGCTGTAGTGAAGGCGTTCTTGCTCCAGCTAATTGGAAAGGTTCTAGCAAATTGAAGGATAACTTGGATTCGGAGTCGAGAAATGCAGATATTTACGGTGGAAGGAATCCTGAGAGTCTGAGTTTGGGGCAGTTTGGTGTTTCTCAGGATGGATTGGGGAATGAGAATAGGGTTAAAAAGGTTAAACTCAAGGTTGGTGGTGTGACGCGTACTATTCAAGCCAACTCATCCAATGGTGCTTCAGGAAGTGGATCGACCATGAAAAGCTCTCGTTCATCGGATGCCTCCAGACCACGCCAAAAGCAACAGAGTAATTCAGACGATAATAATTCTCCTTCTGAACAGAGGAGTGGCCTGCAAGGCCTTCCGTGGAAGGATTTCTCAAGGGGTGGTTTTGGTCTTGGGAAAGAGGAGTCATTCATGGGGAAGGCATCTGGAAAGAACACATCCAGTAAGCAAGGAGACAAGTCCGAACCAGTTCGTAAGAGCAAGCGAGTACCAAAGAGACGTGTACTGGATGTGGAATTTGGTGACGATGATGACAAGGATGATGAGATTCGATACTTGGAAAAGTTGAAAACATCCAAAGTTTCTGCAGTCTACAGAGATGAAGAAGAATTAAGCAAGAAACATCGAAAACTCTCTAGTGTCTCTAACATGGAAAATGCTGCCTCGTCAAGGTCAGGGAAAGATGGTAAGAAAAGGTCTAGATCTGATCGAGTCTATGAGGACACAGATTATGAGGATGAAGAGGAGTCAGGATCTGATGGTGAGCTTGAGGATAAGAAAAAGAAAAAACAGCGGAAGGAATCTGTTGATGTATTGATGGACAGTAAGAGGGAAATGACTCTTACAACGCGTCAACGGGCCCTTCAATCAAGCAAAGATGCCTCTGCATCTGGTGCAAGTTTAATCGAGTTTCCCAATGGATTACCACCTGCCCCGCCTAGAAAGCAAAAGGAGAAGCTTTCAGAACTGGAGCAGCAATTAAAGAAAACTGAGGCTGCACAGAGGCGTAAACAGCAAGTTGAGAAGGCTGCCAGGGAATCTGAGGCTGTAGCTATCAGGAAAATACTTGGTCAAGACTCCAGTAGGAAGAAGCGAGAAGAGAAAATGAAGAAGCGCCAAGAAGAACTAGCACAGGAGAAGGCAGCCAACGCACGAACATCAAATACCATCAGACATGTGATGGGTCCTACTGGCACAGTTGTGACTTTTCCTGAAGAAATGGGACTCCCTAGCATATTGAACTCCAAACCCATCAGTTATCCTCCACCTCGTGAGAAGTGTGCCGGTCCATCTTGTACAAATCCATATAAGTATCGGGATTCAAAATCAAAGCTTCCTCTTTGCAGTCTCCAGTGCTACAAGGCTGTCCAGGAGAAGATGGCGGCTGAAACTATCGGTTGA	1764	0.458	MEDLGSTRFDGLSNAVRRKRSQTSRRPRPDSQPVSEGHDLSPLSSTPPSEDAGKASSDENAGFDTNSKRKEFNLNHCVPQVSSATGSEDDKSHKKSRKDAGFHAFYNSEPGRSGLSNKRCSEGVLAPANWKGSSKLKDNLDSESRNADIYGGRNPESLSLGQFGVSQDGLGNENRVKKVKLKVGGVTRTIQANSSNGASGSGSTMKSSRSSDASRPRQKQQSNSDDNNSPSEQRSGLQGLPWKDFSRGGFGLGKEESFMGKASGKNTSSKQGDKSEPVRKSKRVPKRRVLDVEFGDDDDKDDEIRYLEKLKTSKVSAVYRDEEELSKKHRKLSSVSNMENAASSRSGKDGKKRSRSDRVYEDTDYEDEEESGSDGELEDKKKKKQRKESVDVLMDSKREMTLTTRQRALQSSKDASASGASLIEFPNGLPPAPPRKQKEKLSELEQQLKKTEAAQRRKQQVEKAARESEAVAIRKILGQDSSRKKREEKMKKRQEELAQEKAANARTSNTIRHVMGPTGTVVTFPEEMGLPSILNSKPISYPPPREKCAGPSCTNPYKYRDSKSKLPLCSLQCYKAVQEKMAAETIG*	588

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Rops8g03752	587	Pfam	PAPA-1-like conserved region	445	528	IPR006880	GO:0031011
	Rops8g03752	587	MobiDBLite	consensus disorder prediction	187	236	-	-
	Rops8g03752	587	MobiDBLite	consensus disorder prediction	87	102	-	-
	Rops8g03752	587	MobiDBLite	consensus disorder prediction	436	470	-	-
	Rops8g03752	587	MobiDBLite	consensus disorder prediction	37	53	-	-
	Rops8g03752	587	SMART	PAPA_1_2	445	528	IPR006880	GO:0031011
	Rops8g03752	587	MobiDBLite	consensus disorder prediction	1	514	-	-
	Rops8g03752	587	Coils	Coil	434	471	-	-
	Rops8g03752	587	MobiDBLite	consensus disorder prediction	302	334	-	-
	Rops8g03752	587	MobiDBLite	consensus disorder prediction	403	418	-	-
	Rops8g03752	587	Coils	Coil	483	504	-	-
	Rops8g03752	587	MobiDBLite	consensus disorder prediction	345	361	-	-
	Rops8g03752	587	PANTHER	INO80 COMPLEX SUBUNIT B	10	583	IPR029523	GO:0006338\|GO:0031011
	Rops8g03752	587	MobiDBLite	consensus disorder prediction	478	500	-	-
	Rops8g03752	587	Pfam	HIT zinc finger	544	575	IPR007529	-
	Rops8g03752	587	MobiDBLite	consensus disorder prediction	375	402	-	-
	Rops8g03752	587	MobiDBLite	consensus disorder prediction	72	86	-	-
	Rops8g03752	587	MobiDBLite	consensus disorder prediction	272	294	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Rops8g03752	Rops-Chr8	77947347	77954660	Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Rops8g03752	-		-	gmx:100814323	901.738

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Rops8g03752	8	77947347	77954660	Rops8g03752	8	77947347	77954660	ECH