Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03714 ATGGTGAAAACAGCTTCATCTCCTTCTTCTTCCTCTCCGGTGACTATAACTATCTCTTCCGGAGGCAAAGGTGGAGGAAGTAGAAGCATGGGGCTAACTAGTCCCATAGCACGTGCTTCAGTCTCTAACAACCCAAATTCCCCTCTTAGTGGAAGATCAAACAGAGCTTCAAGTGGGGGAAGAAGGTTATCAGGTGGAGGTAGCAACTATTGCTCTATGTCCAAAGAAGATGGCATGGAAGAAATCAATTCAGAATATGTATCATACACTGTTCATATTCCTCCAACACCAGACCGCAAACCCTTGTCAGATTCACAGACAAGCCTCCCAGAAGATGGAAAGAACACTAGTTATATATCAGGTACAATTTTCACTGGAGGTTTCAACTCTGTGACAAGAGGGCATGTGATTGAATGCTCCATGGGACGTGAGGAGCCACAAAAATCTGGATTGATTTGTGGAATGAAAGGTTGTGATGAGAAAGCAATTCAAGGGAGGTTTAGTGGTTGTCCTTGTGAATGTGGGTTCAAGATTTGCAGGGATTGTTACAATGAGTGTGTTGGAAATGGAGGTGGGGGTAGGTGCCCTGGTTGCAAAGAGCTTTACAAGAATGTGAGTGATGGTGAAGAAGACGAGGAAGAAGAGGTATCTGAGGGTGAAGACCAGGCATTGCCTTTACCTTCCATGGCGGAGTTCAAGTTGGATAAAAGGCTCTCTCTTGTGAAATCATTCAAAGCACAGAACCATCCACCTGATTTTGACCACACTCGTTGGCTCTTTGAAACTAAGGGAACATATGGCTATGGAAATGCAGTGTGGCCCAAAGATGGGTATGGTTCTAATGGATTCGAACCCCCTCCAGATTTTGGAGAGAAAGCTAGAAGACCCTTGAGCCGTAAAGTTAGTGTTTCAGCTGCTATTCTCAGTCCATATAGATTACTTGTTCTGCTACGTCTTGCTGCACTCGGTTTGTTTCTTACATGGAGGATTAGACACCCCAACCATGAGGCAATGTGGTTGTGGGGAATGTCCATAACTTGTGAGCTATGGTTTGCATTTTCATGGCTTCTTGATCAGCTTCCTAAGCTCTGCCCTGTGAACAGAGTTGCTGATCTTTCTGTTCTGAAAGAGCGGTTTGAGTCACCAAACCTTCGCAACCCAAAAGGGAAATCTGATCTTCCAGGAATTGATGTGTTTGTTTCCACAGCAGACCCTGAAAAGGAGCCTCCTCTTGTCACTGCAAACACCATTCTCTCTATCCTTGCAGTTGATTATCCTGTGGAAAAGGTGGCATGTTATTTGTCTGATGATGGTGGAGCTCTGTTGACATTTGAAGCTCTTGCTGAGACTGCTAGCTTTGCGAGAGTATGGGTTCCTTTCTGTAGAAAGCACCAAATAGAGCCCAGAAATCCAGAAGCATATTTTGGGCAGAAGCGTGATTTTCTCAAGAACAAGGTTAGGTTAGACTTTGTGAGGGAGAGGAGAAGGGTGAAGAGGGAATATGATGAATTCAAAGTGAGAATAAATTCCTTACCTGAATCCATAAGGAGAAGATCAGATGCTTACAATGCTCATGAGGAGTTACGAGCCAAGAAGAAACAGATGGAAATGGGTTCCAGTATATCTGAACCTGTTAAGGTTCCTAAAGCAATATGGATGTCTGATGGTTCTCACTGGGCAGGAACTTGGGCATCAGCAGAACAAGACCACTCAAGAGGAGACCATGCTGGTATAATTCAGGCAATGTTAGCTCCACCAAATGCAGAACCAGAATTTGGTGCAGAAGCAGATGGAGAGAACTTGATTGACACAACAGAAGTTGATATTAGGTTGCCTATGCTTGTTTATGTTTCTCGTGAGAAGAGGCCGGGATATGATCACAACAAGAAAGCAGGAGCAATGAATGCTCTTGTTCGCACTAGTGCCATCATGTCCAATGGACCATTCATTCTGAATCTTGATTGTGATCATTACGTCTACAATTCCTTGGCCCTCAGGGAAGGTATGTGCTTTATGCTTGACAGGGGTGGTGATAGGATATGTTATGTTCAATTTCCTCAAAGGTTTGAGGGCATTGACCCCAGTGATCGATATGCAAACCACAATACAGTGTTCTTTGATGGGAGCATGAGAGCTCTTGATGGCTTACAGGGTCCAATGTATGTGGGAACTGGTTGCGTATTCAGAAGAACAGCTCTTTATGGATTTAGTCCTCCTAGAGCTACAGAACATCATGGTTGGTTTGGCAGGAAGAAAATTAAGCTGTTTCTGAGAAAGCCCAAGAAGTCAAAGAAGGAAGAAGATGAAGTAGCCTTGCCAATTAATGGTGATCCTAATGATGATGATGCAGATATTGAGTCCTTGCTTCTTCCCAAAAGGTTTGGTAATTCTACTTCTCTAGCTGCATCCATTCCTGTGGCAGAATACCAGGGAAGGTTGCTTCAAGATTTGCAAGGAAAGGGAACACATGGAAGGCCAGCAGGTTCGCTTGCTGTGCCTCGTGAACCATTAGATGCTGCAACTGTTGCAGAGGCAATAAGTGTCATATCTTGTTTCTATGAGGATAAAACTGAATGGGGGAAAAGAGTAGGGTGGATATATGGTTCTGTTACAGAAGATGTGGTAACTGGCTATAGAATGCACAATAGGGGGTGGAGATCAGTGTATTGTGTGACCAAAAGAGATGCTTTTAGAGGAACAGCTCCAATCAATTTGACAGATAGGCTCCATCAAGTGCTTAGGTGGGCAACAGGATCTGTTGAGATTTTCTTCTCAAGAAACAATGCATTATTAGCCAGTCCTAGAATGAAGTTCTTGCAGAGGGTAGCATATTTCAATGTGGGAATTTACCCTTTCACTTCAATGTTTTTGGTAGTCTATTGTTTCCTTCCTGCAATATCCTTATTTTCAGGGCAGTTTATAGTCCAATCCCTCAGTGCAACTTTTCTAGTGTTCTTGCTTGGCATCACAATCACATTGTGCTTGCTTGCACTACTTGAGATCAAGTGGTCAGGAATCACTCTACATGATTGGTGGAGAAATGAACAGTTTTGGTTAATTGGTGGAACAAGTGCCCACCCTGCTGCTGTTTTACAAGGGTTGTTGAAAGTCATAGCAGGAGTAGACATCTCATTCACACTGACATCAAAGTCAGCCACCCCAGAAGATGGAGATGATGAGTTTGCTGATCTTTATCTAGTAAAGTGGAGCTTTCTAATGATCCCTCCAATTACCATTATGATGGTGAACACAATTGCTATTGCTGTAGGAGTAGCCAGGACTCTGTACAGCCCATTTCCACAATGGAGCAGACTAGTTGGAGGTGTGTTTTTCAGTTTCTGGGTCTTATGCCATCTTTACCCATTTGCAAAGGGGTTGATGGGAAGGAGAGGAAAGGTTCCAACCATTGTCTATGTTTGGTCTGGATTGCTCTCAATTATTATATCTTTGCTTTGGGTGTATGTAAACCCTCCTTCTGGAAGACCACAAGATTACATGAATTTCCAGTTCCCTTAG 3516 0.4349 MVKTASSPSSSSPVTITISSGGKGGGSRSMGLTSPIARASVSNNPNSPLSGRSNRASSGGRRLSGGGSNYCSMSKEDGMEEINSEYVSYTVHIPPTPDRKPLSDSQTSLPEDGKNTSYISGTIFTGGFNSVTRGHVIECSMGREEPQKSGLICGMKGCDEKAIQGRFSGCPCECGFKICRDCYNECVGNGGGGRCPGCKELYKNVSDGEEDEEEEVSEGEDQALPLPSMAEFKLDKRLSLVKSFKAQNHPPDFDHTRWLFETKGTYGYGNAVWPKDGYGSNGFEPPPDFGEKARRPLSRKVSVSAAILSPYRLLVLLRLAALGLFLTWRIRHPNHEAMWLWGMSITCELWFAFSWLLDQLPKLCPVNRVADLSVLKERFESPNLRNPKGKSDLPGIDVFVSTADPEKEPPLVTANTILSILAVDYPVEKVACYLSDDGGALLTFEALAETASFARVWVPFCRKHQIEPRNPEAYFGQKRDFLKNKVRLDFVRERRRVKREYDEFKVRINSLPESIRRRSDAYNAHEELRAKKKQMEMGSSISEPVKVPKAIWMSDGSHWAGTWASAEQDHSRGDHAGIIQAMLAPPNAEPEFGAEADGENLIDTTEVDIRLPMLVYVSREKRPGYDHNKKAGAMNALVRTSAIMSNGPFILNLDCDHYVYNSLALREGMCFMLDRGGDRICYVQFPQRFEGIDPSDRYANHNTVFFDGSMRALDGLQGPMYVGTGCVFRRTALYGFSPPRATEHHGWFGRKKIKLFLRKPKKSKKEEDEVALPINGDPNDDDADIESLLLPKRFGNSTSLAASIPVAEYQGRLLQDLQGKGTHGRPAGSLAVPREPLDAATVAEAISVISCFYEDKTEWGKRVGWIYGSVTEDVVTGYRMHNRGWRSVYCVTKRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSRNNALLASPRMKFLQRVAYFNVGIYPFTSMFLVVYCFLPAISLFSGQFIVQSLSATFLVFLLGITITLCLLALLEIKWSGITLHDWWRNEQFWLIGGTSAHPAAVLQGLLKVIAGVDISFTLTSKSATPEDGDDEFADLYLVKWSFLMIPPITIMMVNTIAIAVGVARTLYSPFPQWSRLVGGVFFSFWVLCHLYPFAKGLMGRRGKVPTIVYVWSGLLSIIISLLWVYVNPPSGRPQDYMNFQFP* 1172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03714 1171 SUPERFAMILY Nucleotide-diphospho-sugar transferases 411 962 IPR029044 -
Rops8g03714 1171 Pfam Cellulose synthase 396 1161 IPR005150 GO:0016020|GO:0016760|GO:0030244
Rops8g03714 1171 MobiDBLite consensus disorder prediction 1 75 - -
Rops8g03714 1171 MobiDBLite consensus disorder prediction 92 114 - -
Rops8g03714 1171 Pfam RING/Ubox like zinc-binding domain 157 203 - -
Rops8g03714 1171 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 597 748 IPR029044 -
Rops8g03714 1171 FunFam cellulose synthase-like protein D3 601 738 - -
Rops8g03714 1171 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 295 1141 - -
Rops8g03714 1171 MobiDBLite consensus disorder prediction 1 71 - -
Rops8g03714 1171 SUPERFAMILY RING/U-box 149 203 - -
Rops8g03714 1171 MobiDBLite consensus disorder prediction 100 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g03714 Rops-Chr8 77497771 77502683 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g03714 37 1171 Glycosyltransferase AT3G03050 66.437 0.0 1546
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03714 K00770 - gmx:100804687 2038.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g03714 8 77497771 77502683 Rops8g03714 8 77497771 77502683 ECH