Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03697 ATGTCTATGCAACCTAAGTTTGGTCGAAGTCCCAGCATCAGAGACCGAGTGGAAGACACTCTCTATGCTCATCGTAACGAACTTATTTCTCTTCTCTCCAGATATGTGGATCAGGGGAAGGGGATTTTGCAACCCCATAGTTTGATTGATGAGCTTGAAAACATCCTTGCTGAAGATGAAGCAGCACAGGATCTTAAAAAAGGCCCCTTTGGTGAAATTATCAAGTCTGCACAGGAAGCCATAGTTTTGCCTCCTTTTGTGGCAATAGCAGTTCGTCCAAGACCTGGTGTTTGGGAATATGTTCGTGTTAATGTCTTTGAACTCAGCGTGGAGCAATTGAGCGTTTCTGAATATCTCAGCTTCAAAGAAGAACTTGTAGATGGAAAGATTAATGATAATTTTGTATTGGAGCTTGATTTTGAGCCATTTAATGCATCATTTCCTCGTCCAACTCGCTCATCATCCATTGGCAATGGTGTCCAATTTCTCAACCGCCACCTTTCTTCAATTATGTTTCATAACAAAGATTCCTTGGAGCCCTTGCTTGATTTCCTCCGAGCTCACAAATATAAAGGCCATGCACTGATGTTAAATGATAGAATACAAAGCATTTCTAAACTTCAGTCTGCTTTGGTCAAGGCCGAGGATCATCTTTCTAAGCTTACACCTGATACACTCTATTCTGATTTTGAATATGTATTACAAGGAATGGGTTTTGAGAGAGGTTGGGGTGATACTGCTGAAAGGGTATTAGAGATGATGCATCTTCTATTGGATATTCTTCAGGCTCCTGATCCTTCTACACTAGAGACTTTTCTTGGGAGAGTGCCGATGGTGTTCAATGTTGTTATATTATCTCCTCATGGCTACTTCGGGCAAGCCAATGTTCTGGGTTTGCCTGACACTGGTGGGCAGGTTGTCTATATACTAGATCAAGTGCGTGCCCTTGAGAATGAGATGCTCCTTCGAATCCAGAAACAAGGACTTGATTTCACTCCTAGAATTCTAATTGTTACCAGGTTAATACCCGAGGCAAAGGGGACAACATGCAACCAGCGGCTAGAAAGAGTCAGTGGTACTGACCACACTCATATTTTGCGTGTCCCATTCAGATCAGAGAAAGGAAAACTCCGTAAATGGATCTCGAGGTTTGATGTATGGCCTTATCTGGAGACTTATGCAGAGGATGTTGCCAGTGAAATTGCTGCTGAGTTACAAGGTTATCCTGACTTTATCATTGGAAACTATAGTGATGGGAATCTTGTTGCATCTTTATTGGCTTATAAAATGGGAGTTACACAGTGTACAATTGCTCATGCGCTGGAGAAGACAAAATATCCAGACTCAGATATATATTGGAAGAAATTTGAGGATAAATACCATTTTTCATGTCAGTTCACTGCTGACCTAATAGCCATGAATCATGCTGATTTTATCATCACCAGTACATACCAAGAGATTGCCGGATCGAAAAATACTGTTGGCCAGTATGAGAGCCACACAGCTTTTACTCTTCCTGGACTCTATAGGGTTGTCCATGGCATTGATGTTTTTGATACCAAGTTCAATATTGTCTCTCCTGGAGCAGATATGTCAATATATTTCCCCTACTCTGAAAAGCAGAAAAGACTTACAGCCCTGCATGGTTCAATTGAAAAGCTATTATATGATACTGAGCCGAGTGATGAGAACGCTGGTTCACTGAAAGACCGGTCAAAGCCCATAATTTTTTCCATGGCAAGGCTAGACAGAGTTAAAAACATAACTGGTTTGGTAGAAAGCTATGCTAAGAACAGCAAATTGAGGGAACTGGTCAACCTTGTTGTAGTAGCTGGTTATATCGATGTAAAGAAGTCCAGCGACAGAGAAGAAATTGCAGAAATTGAAAAGATGCATGATCTCATGAAACAGTATAATTTAGATGGTGAGTTTCGATGGATTACTGCCCAAACAAACAGAGCACGTAATGGGGAGCTGTATCGCTACATAGCAGATACAAAAGGTGCTTTCATTCAGCCTGCTTTCTATGAAGCTTTTGGACTTACAGTTGTGGAGGCCATGACTTGCGGGCTCCCCACATTTGCTACTTGCCATGGTGGTCCTGCTGAGATCATTGAGAATGGTATATCAGGATTCCATATTGATCCGTATCACCCTGACCAAGCTTCAGAGCTATTGGTTGGATTCTTCCAACGATGCAAGGAGGATCCAAGCCATTGGAATAAAATATCTGATGGTGGTCTTCAAAGAATTTATGAAAGGTACACATGGAAGATCTATTCTGAAAGGCTTATGACCTTGGCTGGAGTTTACAGTTTCTGGAAATATGTTTCCAAATTAGAGAGGCGTGAAACTCGACGATATCTTGAGATGTTCTATGTCCTTAAGTTTCGTGATCTGGCAAATTCTGTTCCGCTAGCAAAGGATGATGCAAATTAA 2439 0.4141 MSMQPKFGRSPSIRDRVEDTLYAHRNELISLLSRYVDQGKGILQPHSLIDELENILAEDEAAQDLKKGPFGEIIKSAQEAIVLPPFVAIAVRPRPGVWEYVRVNVFELSVEQLSVSEYLSFKEELVDGKINDNFVLELDFEPFNASFPRPTRSSSIGNGVQFLNRHLSSIMFHNKDSLEPLLDFLRAHKYKGHALMLNDRIQSISKLQSALVKAEDHLSKLTPDTLYSDFEYVLQGMGFERGWGDTAERVLEMMHLLLDILQAPDPSTLETFLGRVPMVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIQKQGLDFTPRILIVTRLIPEAKGTTCNQRLERVSGTDHTHILRVPFRSEKGKLRKWISRFDVWPYLETYAEDVASEIAAELQGYPDFIIGNYSDGNLVASLLAYKMGVTQCTIAHALEKTKYPDSDIYWKKFEDKYHFSCQFTADLIAMNHADFIITSTYQEIAGSKNTVGQYESHTAFTLPGLYRVVHGIDVFDTKFNIVSPGADMSIYFPYSEKQKRLTALHGSIEKLLYDTEPSDENAGSLKDRSKPIIFSMARLDRVKNITGLVESYAKNSKLRELVNLVVVAGYIDVKKSSDREEIAEIEKMHDLMKQYNLDGEFRWITAQTNRARNGELYRYIADTKGAFIQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIENGISGFHIDPYHPDQASELLVGFFQRCKEDPSHWNKISDGGLQRIYERYTWKIYSERLMTLAGVYSFWKYVSKLERRETRRYLEMFYVLKFRDLANSVPLAKDDAN* 813
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03697 812 Gene3D Glycogen Phosphorylase B; 530 757 - -
Rops8g03697 812 Pfam Glycosyl transferases group 1 567 728 IPR001296 GO:0016757
Rops8g03697 812 Pfam Sucrose synthase 9 556 IPR000368 GO:0005985|GO:0016157
Rops8g03697 812 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 298 766 - -
Rops8g03697 812 PANTHER - 9 809 IPR012820 GO:0005985|GO:0016157
Rops8g03697 812 NCBIfam sucrose synthase 25 806 IPR012820 GO:0005985|GO:0016157
Rops8g03697 812 Gene3D - 26 148 - -
Rops8g03697 812 Gene3D - 149 278 - -
Rops8g03697 812 FunFam Sucrose synthase 283 563 - -
Rops8g03697 812 FunFam Sucrose synthase 12 148 - -
Rops8g03697 812 FunFam Sucrose synthase 149 278 - -
Rops8g03697 812 Gene3D Glycogen Phosphorylase B; 283 800 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g03697 Rops-Chr8 77278306 77285777 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g03697 4 810 Glycosyltransferase AT4G02280 82.900 0.0 1429
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03697 K00695 - gmx:100793371 1506.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g03697 8 77278306 77285777 Rops8g03697 8 77278306 77285777 ECH